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从原生污泥中回收肠病毒的方法开发。

Method Development for Enteric Virus Recovery from Primary Sludge.

机构信息

Department of Environmental and Occupational Health Sciences, University of Washington, 4225 Roosevelt Way NE, Suite 100, Seattle, WA 98195, USA.

PATH, 2201 Westlake Ave, Suite 200, Seattle, WA 98121, USA.

出版信息

Viruses. 2021 Mar 9;13(3):440. doi: 10.3390/v13030440.

Abstract

Enteric viruses, such as poliovirus, are a leading cause of gastroenteritis, which causes 2-3 million deaths annually. Environmental surveillance of wastewater supplements clinical surveillance for monitoring enteric virus circulation. However, while many environmental surveillance methods require liquid samples, some at-risk locations utilize pit latrines with waste characterized by high solids content. This study's objective was to develop and evaluate enteric virus concentration protocols for high solids content samples. Two existing protocols were modified and tested using poliovirus type 1 (PV1) seeded into primary sludge. Method 1 (M1) utilized acid adsorption, followed by 2 or 3 elutions (glycine/sodium chloride and/or threonine/sodium chloride), and skimmed milk flocculation. Method 2 (M2) began with centrifugation. The liquid fraction was filtered through a ViroCap filter and eluted (beef extract/glycine). The solid fraction was eluted (beef extract/disodium hydrogen phosphate/citric acid) and concentrated by skimmed milk flocculation. Recovery was enumerated by plaque assay. M1 yielded higher PV1 recovery than M2, though this result was not statistically significant (26.1% and 15.9%, respectively). M1 was further optimized, resulting in significantly greater PV1 recovery when compared to the original protocol ( < 0.05). This method can be used to improve understanding of enteric virus presence in communities without liquid waste streams.

摘要

肠病毒,如脊髓灰质炎病毒,是导致每年 200 万至 300 万人死亡的肠胃炎的主要原因。对废水的环境监测可补充临床监测,以监测肠道病毒的传播。然而,虽然许多环境监测方法需要液体样本,但一些高危地区使用的坑式厕所的废物具有高固体含量的特点。本研究的目的是开发和评估用于高固体含量样品的肠道病毒浓缩方案。对两种现有的方案进行了修改,并使用接种了脊髓灰质炎病毒 1 型(PV1)的原代污泥进行了测试。方法 1(M1)采用酸吸附,随后进行 2 或 3 次洗脱(甘氨酸/氯化钠和/或苏氨酸/氯化钠)和脱脂乳絮凝聚集。方法 2(M2)从离心开始。液体部分通过 ViroCap 过滤器过滤并洗脱(牛肉提取物/甘氨酸)。固体部分用(牛肉提取物/磷酸氢二钠/柠檬酸)洗脱,然后用脱脂乳絮凝聚集浓缩。通过噬斑测定对回收物进行计数。M1 比 M2 产生更高的 PV1 回收率,尽管这一结果没有统计学意义(分别为 26.1%和 15.9%)。M1 进一步优化后,与原始方案相比,PV1 的回收率显著提高(<0.05)。该方法可用于提高对无液体废水的社区中肠道病毒存在情况的了解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2c6c/8000433/e21a2ae98849/viruses-13-00440-g001.jpg

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