Liu Ji, Zhang Yunhui, Liu Jingli, Zhong Haohui, Williams Beth T, Zheng Yanfen, Curson Andrew R J, Sun Chuang, Sun Hao, Song Delei, Wagner Mackenzie Brett, Bermejo Martínez Ana, Todd Jonathan D, Zhang Xiao-Hua
College of Marine Life Sciences, Ocean University of China, 5 Yushan Road, Qingdao 266003, China.
School of Biological Sciences, University of East Anglia, Norwich Research Park, Norwich NR4 7TJ, UK.
Microorganisms. 2021 Mar 22;9(3):657. doi: 10.3390/microorganisms9030657.
Dimethylsulfoniopropionate (DMSP) is one of Earth's most abundant organosulfur molecules. Recently, many marine heterotrophic bacteria were shown to produce DMSP, but few studies have combined culture-dependent and independent techniques to study their abundance, distribution, diversity and activity in seawater or sediment environments. Here we investigate bacterial DMSP production potential in East China Sea (ECS) samples. Total DMSP (DMSPt) concentration in ECS seawater was highest in surface waters (SW) where phytoplankton were most abundant, and it decreased with depth to near bottom waters. However, the percentage of DMSPt mainly apportioned to bacteria increased from the surface to the near bottom water. The highest DMSP concentration was detected in ECS oxic surface sediment (OSS) where phytoplankton were not abundant. Bacteria with the genetic potential to produce DMSP and relevant biosynthesis gene transcripts were prominent in all ECS seawater and sediment samples. Their abundance also increased with depth and was highest in the OSS samples. Microbial enrichments for DMSP-producing bacteria from sediment and seawater identified many novel taxonomic groups of DMSP-producing bacteria. Different profiles of DMSP-producing bacteria existed between seawater and sediment samples and there are still novel DMSP-producing bacterial groups to be discovered in these environments. This study shows that heterotrophic bacteria significantly contribute to the marine DMSP pool and that their contribution increases with water depth and is highest in seabed surface sediment where DMSP catabolic potential is lowest. Furthermore, distinct bacterial groups likely produce DMSP in seawater and sediment samples, and many novel producing taxa exist, especially in the sediment.
二甲基巯基丙酸内盐(DMSP)是地球上含量最为丰富的有机硫分子之一。最近,许多海洋异养细菌被证明能够产生DMSP,但很少有研究结合依赖培养和不依赖培养的技术来研究它们在海水或沉积物环境中的丰度、分布、多样性和活性。在此,我们研究了中国东海(ECS)样本中细菌产生DMSP的潜力。ECS海水中总DMSP(DMSPt)浓度在浮游植物最为丰富的表层水(SW)中最高,并随深度下降至近底层水时降低。然而,主要归因于细菌的DMSPt百分比从表层水到近底层水呈增加趋势。在浮游植物并不丰富的ECS有氧表层沉积物(OSS)中检测到最高的DMSP浓度。具有产生DMSP遗传潜力和相关生物合成基因转录本的细菌在所有ECS海水和沉积物样本中都很突出。它们的丰度也随深度增加,并且在OSS样本中最高。对来自沉积物和海水的产生DMSP细菌进行的微生物富集鉴定出许多新的产生DMSP细菌分类群。海水和沉积物样本之间存在不同的产生DMSP细菌谱,并且在这些环境中仍有新的产生DMSP细菌群有待发现。这项研究表明,异养细菌对海洋DMSP库有显著贡献,并且它们的贡献随水深增加,在DMSP分解代谢潜力最低的海床表层沉积物中最高。此外,不同的细菌群可能在海水和沉积物样本中产生DMSP,并且存在许多新的产生类群,尤其是在沉积物中。