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海洋细菌中二甲基砜丙烯酸盐的生物合成及其关键基因的鉴定。

Dimethylsulfoniopropionate biosynthesis in marine bacteria and identification of the key gene in this process.

机构信息

School of Biological Sciences, University of East Anglia, Norwich Research Park, Norwich NR4 7TJ, UK.

College of Marine Life Sciences, Ocean University of China, 5 Yushan Road, Qingdao 266003, China.

出版信息

Nat Microbiol. 2017 Feb 13;2:17009. doi: 10.1038/nmicrobiol.2017.9.

DOI:10.1038/nmicrobiol.2017.9
PMID:28191900
Abstract

Dimethylsulfoniopropionate (DMSP) is one of the Earth's most abundant organosulfur molecules, a signalling molecule, a key nutrient for marine microorganisms and the major precursor for gaseous dimethyl sulfide (DMS). DMS, another infochemical in signalling pathways, is important in global sulfur cycling and affects the Earth's albedo, and potentially climate, via sulfate aerosol and cloud condensation nuclei production. It was thought that only eukaryotes produce significant amounts of DMSP, but here we demonstrate that many marine heterotrophic bacteria also produce DMSP, probably using the same methionine (Met) transamination pathway as macroalgae and phytoplankton. We identify the first DMSP synthesis gene in any organism, dsyB, which encodes the key methyltransferase enzyme of this pathway and is a reliable reporter for bacterial DMSP synthesis in marine Alphaproteobacteria. DMSP production and dsyB transcription are upregulated by increased salinity, nitrogen limitation and lower temperatures in our model DMSP-producing bacterium Labrenzia aggregata LZB033. With significant numbers of dsyB homologues in marine metagenomes, we propose that bacteria probably make a significant contribution to oceanic DMSP production. Furthermore, because DMSP production is not solely associated with obligate phototrophs, the process need not be confined to the photic zones of marine environments and, as such, may have been underestimated.

摘要

二甲基巯基丙酸酯 (DMSP) 是地球上最丰富的有机硫分子之一,作为一种信号分子,它是海洋微生物的关键营养物质,也是气态二甲基硫 (DMS) 的主要前体。另一种信号通路中的信息素 DMS 通过硫酸盐气溶胶和云凝结核的产生,在全球硫循环中起着重要作用,并影响地球的反照率,从而可能影响气候。人们曾认为只有真核生物会产生大量的 DMSP,但在这里我们证明,许多海洋异养细菌也会产生 DMSP,可能使用与大型藻类和浮游植物相同的蛋氨酸 (Met) 转氨途径。我们鉴定了任何生物体中第一个 DMSP 合成基因 dsyB,它编码该途径的关键甲基转移酶,并且是海洋 α-变形菌中细菌 DMSP 合成的可靠报告基因。在我们的模式 DMSP 产生菌 Labrenzia aggregata LZB033 中,盐度增加、氮限制和较低的温度会上调 DMSP 的产生和 dsyB 的转录。在海洋宏基因组中有大量的 dsyB 同源物,我们提出细菌可能对海洋 DMSP 的产生做出了重大贡献。此外,由于 DMSP 的产生并不完全与专性光养生物有关,因此该过程不必局限于海洋环境的光区,并且可能被低估了。

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