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基于有限角度视图的物体内部动态机器学习体积重建。

Dynamical machine learning volumetric reconstruction of objects' interiors from limited angular views.

作者信息

Kang Iksung, Goy Alexandre, Barbastathis George

机构信息

Department of Electrical Engineering and Computer Science, Massachusetts Institute of Technology, 77 Massachusetts Ave, Cambridge, MA, USA.

Department of Mechanical Engineering, Massachusetts Institute of Technology, Cambridge, MA, 02139, USA.

出版信息

Light Sci Appl. 2021 Apr 7;10(1):74. doi: 10.1038/s41377-021-00512-x.

Abstract

Limited-angle tomography of an interior volume is a challenging, highly ill-posed problem with practical implications in medical and biological imaging, manufacturing, automation, and environmental and food security. Regularizing priors are necessary to reduce artifacts by improving the condition of such problems. Recently, it was shown that one effective way to learn the priors for strongly scattering yet highly structured 3D objects, e.g. layered and Manhattan, is by a static neural network [Goy et al. Proc. Natl. Acad. Sci. 116, 19848-19856 (2019)]. Here, we present a radically different approach where the collection of raw images from multiple angles is viewed analogously to a dynamical system driven by the object-dependent forward scattering operator. The sequence index in the angle of illumination plays the role of discrete time in the dynamical system analogy. Thus, the imaging problem turns into a problem of nonlinear system identification, which also suggests dynamical learning as a better fit to regularize the reconstructions. We devised a Recurrent Neural Network (RNN) architecture with a novel Separable-Convolution Gated Recurrent Unit (SC-GRU) as the fundamental building block. Through a comprehensive comparison of several quantitative metrics, we show that the dynamic method is suitable for a generic interior-volumetric reconstruction under a limited-angle scheme. We show that this approach accurately reconstructs volume interiors under two conditions: weak scattering, when the Radon transform approximation is applicable and the forward operator well defined; and strong scattering, which is nonlinear with respect to the 3D refractive index distribution and includes uncertainty in the forward operator.

摘要

内部体积的有限角度层析成像是一个具有挑战性的、严重不适定的问题,在医学和生物成像、制造、自动化以及环境和食品安全等领域具有实际意义。正则化先验对于通过改善此类问题的条件来减少伪影是必要的。最近,研究表明,学习强散射但高度结构化的三维物体(例如分层物体和曼哈顿式物体)先验的一种有效方法是使用静态神经网络[戈伊等人,《美国国家科学院院刊》116, 19848 - 19856 (2019)]。在此,我们提出一种截然不同的方法,其中从多个角度收集的原始图像集合类似于由与物体相关的前向散射算子驱动的动力系统。照明角度中的序列索引在动力系统类比中扮演离散时间的角色。因此,成像问题转变为非线性系统识别问题,这也表明动态学习更适合用于正则化重建。我们设计了一种循环神经网络(RNN)架构,其基本构建块是一种新颖的可分离卷积门控循环单元(SC - GRU)。通过对几个定量指标的全面比较,我们表明动态方法适用于有限角度方案下的一般内部体积重建。我们表明,这种方法在两种情况下都能准确重建体积内部:弱散射,此时拉东变换近似适用且前向算子定义良好;以及强散射,这对于三维折射率分布是非线性的,并且在前向算子中包含不确定性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/91be/8027224/b1797c7193ac/41377_2021_512_Fig1_HTML.jpg

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