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通过转录组分析鉴定感染犬巨噬细胞系DH82中树突状细胞成熟、Toll样受体(TLR)和触发受体表达分子1(TREM1)信号通路

Identification of Dendritic Cell Maturation, TLR, and TREM1 Signaling Pathways in the Infected Canine Macrophage Cells, DH82, Through Transcriptomic Analysis.

作者信息

Park Woo Bin, Kim Suji, Shim Soojin, Yoo Han Sang

机构信息

Department of Infectious Diseases, College of Veterinary Medicine, Seoul National University, Seoul, South Korea.

BK21 Four Future Veterinary Medicine Leading Education and Research Center, Seoul National University, Seoul, South Korea.

出版信息

Front Vet Sci. 2021 Mar 19;8:619759. doi: 10.3389/fvets.2021.619759. eCollection 2021.

Abstract

Research has been undertaken to understand the host immune response to infection because of the importance of the disease in the public health field and the clinical field. However, the previous mechanisms governing this infection have not been elucidated. Therefore, models, which mimic the infection route using a canine epithelial cell line, D17, and a canine macrophage, DH82, were established to determine these mechanisms by performing an analysis of the transcriptomes in the cells. In this study, a coculture model was constructed by using the D17 cell line and DH82 cell line in a transwell plate. Also, a single cell line culture system using DH82 was performed. After the stimulation of the cells in the two different systems infected with , the gene expression in the macrophages of the two different systems was analyzed by using RNA-sequencing (RNA-seq), and a transcriptomic analysis was performed by using the Ingenuity Pathway Analysis (IPA). Gene expression patterns were analyzed in the DH82 cell line at 2, 12, and 24 h after the stimulation with . Changes in the upregulated or downregulated genes showing 2-fold or higher were identified at each time point by comparing with the non-stimulated group. Differentially expressed genes (DEGs) between the two culture models were identified by using the IPA program. Generally, the number of genes expressed in the single cell line culture was higher than the number of genes expressed in the coculture model for all-time points. The expression levels of those genes were higher in the single cell line culture ( < 0.05). This analysis indicated that the immune response-related pathways, especially, the dendritic cell maturation, Triggering receptor expression on myeloid cells 1 (TREM1) signaling, and Toll-like receptor (TLR) signaling pathway, were significantly induced in both the culture systems with higher -values and -scores. An increase in the expression level of genes related to the pathways was observed over time. All pathways are commonly associated with a manifestation of pro-inflammatory cytokines and early immune responses. However, the Peroxisome proliferator-activation receptor (PPAR) signaling and Liver X Receptor/Retinoid X Receptor (LXR/RXR) signaling associated with lipid metabolism were reduced. These results indicate that early immune responses might be highly activated in infection. Therefore, these results might suggest clues to reveal the early immune response of the canine to infection, particularly TLR signaling.

摘要

由于该疾病在公共卫生领域和临床领域的重要性,人们开展了相关研究以了解宿主对感染的免疫反应。然而,此前控制这种感染的机制尚未阐明。因此,建立了利用犬上皮细胞系D17和犬巨噬细胞DH82模拟感染途径的模型,通过对细胞中的转录组进行分析来确定这些机制。在本研究中,通过在Transwell板中使用D17细胞系和DH82细胞系构建了共培养模型。此外,还进行了使用DH82的单细胞系培养系统。在用[病原体名称未给出]感染两种不同系统中的细胞后,通过RNA测序(RNA-seq)分析两种不同系统中巨噬细胞的基因表达,并使用Ingenuity通路分析(IPA)进行转录组分析。在用[病原体名称未给出]刺激后2小时、12小时和24小时,对DH82细胞系中的基因表达模式进行了分析。通过与未刺激组比较,在每个时间点鉴定出上调或下调2倍或更高的基因变化。使用IPA程序鉴定了两种培养模型之间的差异表达基因(DEG)。一般来说,在所有时间点,单细胞系培养中表达的基因数量高于共培养模型中表达的基因数量。这些基因在单细胞系培养中的表达水平更高(P<0.05)。该分析表明,免疫反应相关途径,特别是树突状细胞成熟、髓系细胞上触发受体表达1(TREM1)信号传导和Toll样受体(TLR)信号传导途径,在具有更高P值和Z分数的两种培养系统中均被显著诱导。随着时间的推移,观察到与这些途径相关的基因表达水平增加。所有途径通常都与促炎细胞因子的表现和早期免疫反应有关。然而,与脂质代谢相关的过氧化物酶体增殖物激活受体(PPAR)信号传导和肝X受体/视黄醇X受体(LXR/RXR)信号传导减少。这些结果表明,在[病原体名称未给出]感染中早期免疫反应可能被高度激活。因此,这些结果可能为揭示犬对[病原体名称未给出]感染的早期免疫反应,特别是TLR信号传导,提供线索。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2183/8020338/e18c5acf5e13/fvets-08-619759-g0001.jpg

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