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癌细胞中血管内皮生长因子新型生物碱抑制剂的筛选:一种综合计算方法。

Screening of novel alkaloid inhibitors for vascular endothelial growth factor in cancer cells: an integrated computational approach.

作者信息

Shahik Shah Md, Salauddin Asma, Hossain Md Shakhawat, Noyon Sajjad Hossain, Moin Abu Tayab, Mizan Shagufta, Raza Md Thosif

机构信息

Molecular Biology Department, AFC Agro Biotech Ltd., Dhaka 1212, Bangladesh.

Bioinformatics Division, Disease Biology and Molecular Epidemiology Research Group (dBme), Chattogram 4202, Bangladesh.

出版信息

Genomics Inform. 2021 Mar;19(1):e6. doi: 10.5808/gi.20068. Epub 2021 Mar 15.

Abstract

Vascular endothelial growth factor (VEGF) is expressed at elevated levels by most cancer cells, which can stimulate vascular endothelial cell growth, survival, proliferation as well as trigger angiogenesis modulated by VEGF and VEGFR (a tyrosine kinase receptor) signaling. The angiogenic effects of the VEGF family are thought to be primarily mediated through the interaction of VEGF with VEGFR-2. Targeting this signaling molecule and its receptor is a novel approach for blocking angiogenesis. In recent years virtual high throughput screening has emerged as a widely accepted powerful technique in the identification of novel and diverse leads. The high resolution X-ray structure of VEGF has paved the way to introduce new small molecular inhibitors by structure-based virtual screening. In this study using different alkaloid molecules as potential novel inhibitors of VEGF, we proposed three alkaloid candidates for inhibiting VEGF and VEGFR mediated angiogenesis. As these three alkaloid compounds exhibited high scoring functions, which also highlights their high binding ability, it is evident that these alkaloids can be taken to further drug development pipelines for use as novel lead compounds to design new and effective drugs against cancer.

摘要

血管内皮生长因子(VEGF)在大多数癌细胞中高表达,它能刺激血管内皮细胞生长、存活、增殖,并通过VEGF和VEGFR(一种酪氨酸激酶受体)信号传导触发血管生成。VEGF家族的血管生成作用被认为主要是通过VEGF与VEGFR-2的相互作用介导的。靶向这种信号分子及其受体是阻断血管生成的一种新方法。近年来,虚拟高通量筛选已成为一种广泛接受的强大技术,用于识别新型和多样化的先导化合物。VEGF的高分辨率X射线结构为通过基于结构的虚拟筛选引入新的小分子抑制剂铺平了道路。在本研究中,我们使用不同的生物碱分子作为VEGF的潜在新型抑制剂,提出了三种抑制VEGF和VEGFR介导的血管生成的生物碱候选物。由于这三种生物碱化合物表现出高评分功能,这也突出了它们的高结合能力,显然这些生物碱可以进入进一步的药物开发流程,用作新型先导化合物来设计新的、有效的抗癌药物。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/32d2/8042301/c9a2e1b8df08/gi-20068f1.jpg

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