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基于肽和肽缀合物纳米结构的生物催化剂。

Biocatalysts Based on Peptide and Peptide Conjugate Nanostructures.

机构信息

Department of Chemistry, University of Reading, RG6 6AD Reading, United Kingdom.

出版信息

Biomacromolecules. 2021 May 10;22(5):1835-1855. doi: 10.1021/acs.biomac.1c00240. Epub 2021 Apr 12.

Abstract

Peptides and their conjugates (to lipids, bulky N-terminals, or other groups) can self-assemble into nanostructures such as fibrils, nanotubes, coiled coil bundles, and micelles, and these can be used as platforms to present functional residues in order to catalyze a diversity of reactions. Peptide structures can be used to template catalytic sites inspired by those present in natural enzymes as well as simpler constructs using individual catalytic amino acids, especially proline and histidine. The literature on the use of peptide (and peptide conjugate) α-helical and β-sheet structures as well as turn or disordered peptides in the biocatalysis of a range of organic reactions including hydrolysis and a variety of coupling reactions (e.g., aldol reactions) is reviewed. The simpler design rules for peptide structures compared to those of folded proteins permit ready design (minimalist approach) of effective catalytic structures that mimic the binding pockets of natural enzymes or which simply present catalytic motifs at high density on nanostructure scaffolds. Research on these topics is summarized, along with a discussion of metal nanoparticle catalysts templated by peptide nanostructures, especially fibrils. Research showing the high activities of different classes of peptides in catalyzing many reactions is highlighted. Advances in peptide design and synthesis methods mean they hold great potential for future developments of effective bioinspired and biocompatible catalysts.

摘要

肽及其缀合物(与脂质、大体积 N 端或其他基团)可以自组装成纳米结构,如纤维、纳米管、螺旋束和胶束,这些可以用作平台来呈现功能残基,以催化多种反应。肽结构可以用于模板化催化位点,这些位点受到天然酶中存在的催化位点以及使用单个催化氨基酸(特别是脯氨酸和组氨酸)的更简单结构的启发。本文综述了肽(和肽缀合物)α-螺旋和β-折叠结构以及转角或无规肽在一系列有机反应中的生物催化作用,包括水解和各种偶联反应(如醛醇反应)。与折叠蛋白相比,肽结构的设计规则更简单,允许对有效的催化结构进行简单设计(极简主义方法),这些结构模拟天然酶的结合口袋,或者简单地在纳米结构支架上高密度呈现催化基序。本文总结了这些主题的研究,并讨论了肽纳米结构(特别是纤维)模板化的金属纳米颗粒催化剂。突出显示了不同类别的肽在催化许多反应中具有高活性。肽设计和合成方法的进步意味着它们在未来开发有效仿生和生物相容催化剂方面具有巨大潜力。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b874/8154259/b2be91c7cfdd/bm1c00240_0014.jpg

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