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对 445 份莴苣属植物进行全基因组重测序揭示了栽培生菜的驯化历史。

Whole-genome resequencing of 445 Lactuca accessions reveals the domestication history of cultivated lettuce.

机构信息

State Key Laboratory of Agricultural Genomics, BGI-Shenzhen, Shenzhen, China.

Centre for Genetic Resources, the Netherlands, Wageningen, the Netherlands.

出版信息

Nat Genet. 2021 May;53(5):752-760. doi: 10.1038/s41588-021-00831-0. Epub 2021 Apr 12.

Abstract

Lettuce (Lactuca sativa) is an important vegetable crop worldwide. Cultivated lettuce is believed to be domesticated from L. serriola; however, its origins and domestication history remain to be elucidated. Here, we sequenced a total of 445 Lactuca accessions, including major lettuce crop types and wild relative species, and generated a comprehensive map of lettuce genome variations. In-depth analyses of population structure and demography revealed that lettuce was first domesticated near the Caucasus, which was marked by loss of seed shattering. We also identified the genetic architecture of other domestication traits and wild introgressions in major resistance clusters in the lettuce genome. This study provides valuable genomic resources for crop breeding and sheds light on the domestication history of cultivated lettuce.

摘要

生菜(Lactuca sativa)是全球范围内一种重要的蔬菜作物。人们认为栽培生菜是由山莴苣(Lactuca serriola)驯化而来的;然而,其起源和驯化历史仍有待阐明。在这里,我们总共对 445 份生菜品种进行了测序,包括主要的生菜作物类型和野生近缘种,并生成了生菜基因组变异的综合图谱。对种群结构和人口动态的深入分析表明,生菜最初是在高加索地区被驯化的,其特征是种子不裂。我们还鉴定了生菜基因组中主要抗性簇中其他驯化特征和野生渐渗的遗传结构。这项研究为作物育种提供了有价值的基因组资源,并阐明了栽培生菜的驯化历史。

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