Wang Jian, Wu Bizhi, Kohnen Markus V, Lin Daqi, Yang Changcai, Wang Xiaowei, Qiang Ailing, Liu Wei, Kang Jianbin, Li Hua, Shen Jing, Yao Tianhao, Su Jun, Li Bangyu, Gu Lianfeng
Institute of Crop Sciences, Ningxia Academy of Agriculture and Forestry Science, Yinchuan, Ningxia 750105, China.
Basic Forestry and Proteomics Research Center, College of Forestry, Fujian Agriculture and Forestry University, Fuzhou 350002, China.
Plant Phenomics. 2021 Mar 30;2021:9765952. doi: 10.34133/2021/9765952. eCollection 2021.
High-yield rice cultivation is an effective way to address the increasing food demand worldwide. Correct classification of high-yield rice is a key step of breeding. However, manual measurements within breeding programs are time consuming and have high cost and low throughput, which limit the application in large-scale field phenotyping. In this study, we developed an accurate large-scale approach and presented the potential usage of hyperspectral data for rice yield measurement using the XGBoost algorithm to speed up the rice breeding process for many breeders. In total, 13 japonica rice lines in regional trials in northern China were divided into different categories according to the manual measurement of yield. Using an Unmanned Aerial Vehicle (UAV) platform equipped with a hyperspectral camera to capture images over multiple time series, a rice yield classification model based on the XGBoost algorithm was proposed. Four comparison experiments were carried out through the intraline test and the interline test considering lodging characteristics at the midmature stage or not. The result revealed that the degree of lodging in the midmature stage was an important feature affecting the classification accuracy of rice. Thus, we developed a low-cost, high-throughput phenotyping and nondestructive method by combining UAV-based hyperspectral measurements and machine learning for estimation of rice yield to improve rice breeding efficiency.
高产水稻种植是满足全球不断增长的粮食需求的有效途径。高产水稻的正确分类是育种的关键步骤。然而,育种计划中的人工测量耗时、成本高且通量低,这限制了其在大规模田间表型分析中的应用。在本研究中,我们开发了一种准确的大规模方法,并展示了利用XGBoost算法使用高光谱数据进行水稻产量测量的潜在用途,以加快许多育种者的水稻育种进程。在中国北方区域试验中的13个粳稻品系根据产量的人工测量被分为不同类别。使用配备高光谱相机的无人机平台在多个时间序列上采集图像,提出了一种基于XGBoost算法的水稻产量分类模型。通过考虑或不考虑成熟期倒伏特征的品系内试验和品系间试验进行了四项比较实验。结果表明,成熟期的倒伏程度是影响水稻分类准确性的一个重要特征。因此,我们通过结合基于无人机的高光谱测量和机器学习开发了一种低成本、高通量的表型分析和无损方法来估计水稻产量,以提高水稻育种效率。