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通过生物信息学分析,发现一种含有血小板反应蛋白基序的解整合素金属蛋白酶 6 可作为一种新的胃癌预后生物标志物。

Identified a disintegrin and metalloproteinase with thrombospondin motifs 6 serve as a novel gastric cancer prognostic biomarker by bioinformatics analysis.

机构信息

Department of Gastrointestinal Surgery, Guangxi Medical University Affiliated Tumor Hospital, Guangxi Clinical Research Center for Colorectal Cancer, Nanning 530021, Guangxi Zhuang Autonomous Region, People's Republic of China.

Department of Hepatobiliary Surgery, The First Affiliated Hospital of Guangxi Medical University, Nanning 530021, Guangxi Zhuang Autonomous Region, People's Republic of China.

出版信息

Biosci Rep. 2021 Apr 30;41(4). doi: 10.1042/BSR20204359.

DOI:10.1042/BSR20204359
PMID:33851708
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8065180/
Abstract

OBJECTIVE

We aimed to explore the prognostic value of a disintegrin and metalloproteinase with thrombospondin motifs (ADAMTS) genes in gastric cancer (GC).

METHODS

The RNA-sequencing (RNA-seq) expression data for 351 GC patients and other relevant clinical data were acquired from The Cancer Genome Atlas (TCGA). Survival analysis and a genome-wide gene set enrichment analysis (GSEA) were performed to define the underlying molecular value of the ADAMTS genes in GC development. Besides, qRT-PCR and immunohistochemistry were all employed to validate the relationship between the expression of these genes and GC patient prognosis.

RESULTS

The Log rank test with both Cox regression and Kaplan-Meier survival analyses showed that ADAMTS6 expression profile correlated with the GC patients clinical outcome. Patients with a high expression of ADAMTS6 were associated with poor overall survival (OS). Comprehensive survival analysis of the ADAMTS genes suggests that ADAMTS6 might be an independent predictive factor for the OS in patients with GC. Besides, GSEA demonstrated that ADAMTS6 might be involved in multiple biological processes and pathways, such as the vascular endothelial growth factor A (VEGFA), kirsten rat sarcoma viral oncogene (KRAS), tumor protein P53, c-Jun N-terminal kinase (JNK), cadherin (CDH1) or tumor necrosis factor (TNF) pathways. It was also confirmed by immunohistochemistry and qRT-PCR that ADAMTS6 is highly expressed in GC, which may be related to the prognosis of GC patients.

CONCLUSION

In summary, our study demonstrated that ADAMTS6 gene could be used as a potential molecular marker for GC prognosis.

摘要

目的

我们旨在探讨解整合素金属蛋白酶与凝血酶样金属蛋白酶(ADAMTS)基因在胃癌(GC)中的预后价值。

方法

从癌症基因组图谱(TCGA)中获取了 351 名 GC 患者的 RNA 测序(RNA-seq)表达数据和其他相关临床数据。进行生存分析和全基因组基因集富集分析(GSEA),以确定 ADAMTS 基因在 GC 发展中的潜在分子价值。此外,还采用 qRT-PCR 和免疫组织化学法验证了这些基因的表达与 GC 患者预后之间的关系。

结果

Cox 回归和 Kaplan-Meier 生存分析的对数秩检验显示,ADAMTS6 表达谱与 GC 患者的临床结局相关。ADAMTS6 高表达的患者总生存期(OS)较差。ADAMTS 基因的综合生存分析表明,ADAMTS6 可能是 GC 患者 OS 的独立预测因子。此外,GSEA 表明,ADAMTS6 可能参与多个生物学过程和途径,如血管内皮生长因子 A(VEGFA)、 Kirsten 大鼠肉瘤病毒癌基因(KRAS)、肿瘤蛋白 P53、c-Jun N-末端激酶(JNK)、钙粘蛋白(CDH1)或肿瘤坏死因子(TNF)途径。免疫组织化学法和 qRT-PCR 也证实了 ADAMTS6 在 GC 中高表达,这可能与 GC 患者的预后有关。

结论

综上所述,我们的研究表明,ADAMTS6 基因可以作为 GC 预后的潜在分子标志物。

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本文引用的文献

1
High delta-like ligand 4 expression correlates with a poor clinical outcome in gastric cancer.高δ样配体4表达与胃癌不良临床预后相关。
J Cancer. 2019 Jun 2;10(14):3172-3178. doi: 10.7150/jca.30257. eCollection 2019.
2
Bridging genomics and phenomics of gastric carcinoma.胃癌的基因组学与表型组学研究进展
Int J Cancer. 2019 Nov 1;145(9):2407-2417. doi: 10.1002/ijc.32228. Epub 2019 Mar 18.
3
Overexpression of ADAMTS-2 in tumor cells and stroma is predictive of poor clinical prognosis in gastric cancer.肿瘤细胞和基质中 ADAMTS-2 的过表达与胃癌的不良临床预后相关。
肺腺癌中基底膜相关基因的功能及预后价值
Front Pharmacol. 2023 May 5;14:1185380. doi: 10.3389/fphar.2023.1185380. eCollection 2023.
4
ADAMTS6: Emerging roles in cardiovascular, musculoskeletal and cancer biology.ADAMTS6:在心血管、肌肉骨骼和癌症生物学中的新作用。
Front Mol Biosci. 2022 Oct 19;9:1023511. doi: 10.3389/fmolb.2022.1023511. eCollection 2022.
Hum Pathol. 2019 Feb;84:44-51. doi: 10.1016/j.humpath.2018.08.030. Epub 2018 Sep 13.
4
Global cancer statistics 2018: GLOBOCAN estimates of incidence and mortality worldwide for 36 cancers in 185 countries.全球癌症统计数据 2018:GLOBOCAN 对全球 185 个国家/地区 36 种癌症的发病率和死亡率的估计。
CA Cancer J Clin. 2018 Nov;68(6):394-424. doi: 10.3322/caac.21492. Epub 2018 Sep 12.
5
ADAMTS-6 is a predictor of poor prognosis in patients with esophageal squamous cell carcinoma.ADAMTS-6 是食管鳞癌患者预后不良的预测因子。
Exp Mol Pathol. 2018 Apr;104(2):134-139. doi: 10.1016/j.yexmp.2018.02.004. Epub 2018 Feb 21.
6
[Report of Cancer Incidence and Mortality in China, 2014].《2014年中国癌症发病与死亡报告》
Zhonghua Zhong Liu Za Zhi. 2018 Jan 23;40(1):5-13. doi: 10.3760/cma.j.issn.0253-3766.2018.01.002.
7
NR4A1-induced increase in the sensitivity of a human gastric cancer line to TNFα-mediated apoptosis is associated with the inhibition of JNK/Parkin-dependent mitophagy.NR4A1 诱导人胃癌细胞系对 TNFα 介导的细胞凋亡敏感性增加与抑制 JNK/Parkin 依赖性线粒体自噬有关。
Int J Oncol. 2018 Feb;52(2):367-378. doi: 10.3892/ijo.2017.4216. Epub 2017 Dec 4.
8
Alcohol, smoking and risk of oesophago-gastric cancer.酒精、吸烟与食管胃交界腺癌风险。
Best Pract Res Clin Gastroenterol. 2017 Oct;31(5):509-517. doi: 10.1016/j.bpg.2017.09.002. Epub 2017 Sep 8.
9
Epigenetic silencing of ADAMTS5 is associated with increased invasiveness and poor survival in patients with colorectal cancer.ADAMTS5的表观遗传沉默与结直肠癌患者侵袭性增加及预后不良相关。
J Cancer Res Clin Oncol. 2018 Feb;144(2):215-227. doi: 10.1007/s00432-017-2545-9. Epub 2017 Nov 15.
10
[Detection of RAS genes mutation using the Cobas method in a private laboratory of pathology: Medical and economical study in comparison to a public platform of molecular biology of cancer].[在一家私立病理实验室中使用Cobas方法检测RAS基因突变:与癌症分子生物学公共平台相比的医学与经济学研究]
Bull Cancer. 2017 Jul-Aug;104(7-8):662-674. doi: 10.1016/j.bulcan.2017.05.005. Epub 2017 Jul 5.