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Predicting master transcription factors from pan-cancer expression data.从泛癌表达数据中预测主转录因子。
Sci Adv. 2021 Nov 26;7(48):eabf6123. doi: 10.1126/sciadv.abf6123. Epub 2021 Nov 24.
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Epithelial Planar Bipolarity Emerges from Notch-Mediated Asymmetric Inhibition of Emx2.上皮平面二极性由 Notch 介导的 Emx2 不对称抑制产生。
Curr Biol. 2020 Mar 23;30(6):1142-1151.e6. doi: 10.1016/j.cub.2020.01.027. Epub 2020 Feb 27.
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The Repertoire of Serous Ovarian Cancer Non-genetic Heterogeneity Revealed by Single-Cell Sequencing of Normal Fallopian Tube Epithelial Cells.单细胞测序正常输卵管上皮细胞揭示浆液性卵巢癌非遗传异质性的 repertoire。
Cancer Cell. 2020 Feb 10;37(2):226-242.e7. doi: 10.1016/j.ccell.2020.01.003.
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Single-Cell Transcriptomic Atlas of Primate Ovarian Aging.灵长类动物卵巢衰老的单细胞转录组图谱
Cell. 2020 Feb 6;180(3):585-600.e19. doi: 10.1016/j.cell.2020.01.009. Epub 2020 Jan 30.
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A Study of High-Grade Serous Ovarian Cancer Origins Implicates the SOX18 Transcription Factor in Tumor Development.高级别浆液性卵巢癌起源的研究提示 SOX18 转录因子在肿瘤发生中的作用。
Cell Rep. 2019 Dec 10;29(11):3726-3735.e4. doi: 10.1016/j.celrep.2019.10.122.
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Heterogeneity within Stratified Epithelial Stem Cell Populations Maintains the Oral Mucosa in Response to Physiological Stress.分层上皮干细胞群体中的异质性在生理应激反应中维持口腔黏膜。
Cell Stem Cell. 2019 Dec 5;25(6):814-829.e6. doi: 10.1016/j.stem.2019.11.005.
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Transcriptional profiling of circulating tumor cells in multiple myeloma: a new model to understand disease dissemination.多发性骨髓瘤循环肿瘤细胞的转录组分析:一种了解疾病传播的新模型。
Leukemia. 2020 Feb;34(2):589-603. doi: 10.1038/s41375-019-0588-4. Epub 2019 Oct 8.
8
Phase I Study of Lentiviral-Transduced Chimeric Antigen Receptor-Modified T Cells Recognizing Mesothelin in Advanced Solid Cancers.嵌合抗原受体修饰的慢病毒转导 T 细胞识别间皮素治疗晚期实体瘤的 I 期临床研究。
Mol Ther. 2019 Nov 6;27(11):1919-1929. doi: 10.1016/j.ymthe.2019.07.015. Epub 2019 Jul 30.
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Primary hepatocytes and their cultures for the testing of drug-induced liver injury.用于药物性肝损伤检测的原代肝细胞及其培养物。
Adv Pharmacol. 2019;85:1-30. doi: 10.1016/bs.apha.2018.08.001. Epub 2018 Sep 1.
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Comprehensive Integration of Single-Cell Data.单细胞数据的综合整合。
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单细胞转录组学鉴定出在人类输卵管中驱动分化和肿瘤发生的基因表达网络。

Single-cell transcriptomics identifies gene expression networks driving differentiation and tumorigenesis in the human fallopian tube.

机构信息

Center for Cancer Immunotherapy, La Jolla Institute for Immunology, La Jolla, CA, USA.

Women's Cancer Research Program at the Samuel Oschin Comprehensive Cancer Center, Cedars-Sinai Medical Center, Los Angeles, CA, USA; Division of Gynecologic Oncology, Department of Obstetrics and Gynecology, Cedars-Sinai Medical Center, Los Angeles, CA, USA.

出版信息

Cell Rep. 2021 Apr 13;35(2):108978. doi: 10.1016/j.celrep.2021.108978.

DOI:10.1016/j.celrep.2021.108978
PMID:33852846
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10108902/
Abstract

The human fallopian tube harbors the cell of origin for the majority of high-grade serous "ovarian" cancers (HGSCs), but its cellular composition, particularly the epithelial component, is poorly characterized. We perform single-cell transcriptomic profiling of around 53,000 individual cells from 12 primary fallopian specimens to map their major cell types. We identify 10 epithelial subpopulations with diverse transcriptional programs. Based on transcriptional signatures, we reconstruct a trajectory whereby secretory cells differentiate into ciliated cells via a RUNX3 intermediate. Computational deconvolution of advanced HGSCs identifies the "early secretory" population as a likely precursor state for the majority of HGSCs. Its signature comprises both epithelial and mesenchymal features and is enriched in mesenchymal-type HGSCs (p = 6.7 × 10), a group known to have particularly poor prognoses. This cellular and molecular compendium of the human fallopian tube in cancer-free women is expected to advance our understanding of the earliest stages of fallopian epithelial neoplasia.

摘要

人类输卵管是大多数高级别浆液性“卵巢”癌(HGSCs)的起源细胞,但它的细胞组成,特别是上皮成分,特征描述较差。我们对来自 12 个原发性输卵管标本的大约 53000 个单个细胞进行单细胞转录组谱分析,以绘制其主要细胞类型图。我们确定了 10 个具有不同转录程序的上皮亚群。基于转录特征,我们重建了一条轨迹,即分泌细胞通过 RUNX3 中间产物分化为纤毛细胞。对高级别 HGSC 的计算反卷积将“早期分泌”群体鉴定为大多数 HGSC 的可能前体状态。其特征包含上皮和间充质特征,并且在间充质型 HGSC 中富集(p = 6.7×10),这是一组已知预后特别差的肿瘤。这份来自无癌女性的人类输卵管的细胞和分子汇编有望促进我们对输卵管上皮肿瘤发生的最早阶段的理解。