• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

相似文献

1
Macromolecular regulators have matching effects on the phase equilibrium and interfacial tension of biomolecular condensates.大分子调节剂对生物分子凝聚相的相平衡和界面张力具有匹配的影响。
Protein Sci. 2021 Jul;30(7):1360-1370. doi: 10.1002/pro.4084. Epub 2021 Apr 24.
2
Aging can transform single-component protein condensates into multiphase architectures.衰老是如何将单组份蛋白质凝聚物转化为多相结构的。
Proc Natl Acad Sci U S A. 2022 Jun 28;119(26):e2119800119. doi: 10.1073/pnas.2119800119. Epub 2022 Jun 21.
3
Shape recovery of deformed biomolecular droplets: Dependence on condensate viscoelasticity.变形生物分子液滴的形状恢复:对凝聚态粘弹性的依赖。
J Chem Phys. 2021 Oct 14;155(14):145102. doi: 10.1063/5.0064247.
4
Multiphase organization is a second phase transition within multi-component biomolecular condensates.多相组织是多组分生物分子凝聚物中的第二相转变。
J Chem Phys. 2022 May 21;156(19):191104. doi: 10.1063/5.0088004.
5
Macromolecular Regulation of the Material Properties of Biomolecular Condensates.生物分子凝聚物材料特性的大分子调控
J Phys Chem Lett. 2022 Jun 8:5285-5290. doi: 10.1021/acs.jpclett.2c00824.
6
Capillary forces generated by biomolecular condensates.由生物分子凝聚物产生的毛细作用力。
Nature. 2022 Sep;609(7926):255-264. doi: 10.1038/s41586-022-05138-6. Epub 2022 Sep 7.
7
Quantifying surface tension and viscosity in biomolecular condensates by FRAP-ID.通过 FRAP-ID 定量生物分子凝聚物中的表面张力和粘度。
Biophys J. 2024 Oct 1;123(19):3366-3374. doi: 10.1016/j.bpj.2024.07.043. Epub 2024 Aug 8.
8
Nucleation landscape of biomolecular condensates.生物分子凝聚物的成核景观。
Nature. 2021 Nov;599(7885):503-506. doi: 10.1038/s41586-021-03905-5. Epub 2021 Sep 22.
9
Protein Condensate Atlas from predictive models of heteromolecular condensate composition.蛋白质凝聚物图谱来自异源凝聚物组成的预测模型。
Nat Commun. 2024 Jul 10;15(1):5418. doi: 10.1038/s41467-024-48496-7.
10
Surface tension measurement and calculation of model biomolecular condensates.表面张力测量和模型生物分子凝聚体的计算。
Soft Matter. 2023 Nov 22;19(45):8706-8716. doi: 10.1039/d3sm00820g.

引用本文的文献

1
Amino acid-dependent phase equilibrium and material properties of tetrapeptide condensates.四肽缩合物的氨基酸依赖性相平衡和材料特性
Cell Rep Phys Sci. 2024 Oct 16;5(10). doi: 10.1016/j.xcrp.2024.102218. Epub 2024 Sep 23.
2
Fundamental Aspects of Phase-Separated Biomolecular Condensates.相分离生物分子凝聚体的基本方面。
Chem Rev. 2024 Jul 10;124(13):8550-8595. doi: 10.1021/acs.chemrev.4c00138. Epub 2024 Jun 17.
3
Amino Acid-Dependent Material Properties of Tetrapeptide Condensates.四肽缩合物的氨基酸依赖性材料特性
bioRxiv. 2024 May 15:2024.05.14.594233. doi: 10.1101/2024.05.14.594233.
4
Determinants of viscoelasticity and flow activation energy in biomolecular condensates.生物分子凝聚物粘弹性和流动激活能的决定因素。
Sci Adv. 2024 Feb 16;10(7):eadi6539. doi: 10.1126/sciadv.adi6539.
5
Proximity to criticality predicts surface properties of biomolecular condensates.临近临界性可预测生物分子凝聚物的表面性质。
Proc Natl Acad Sci U S A. 2023 Jun 6;120(23):e2220014120. doi: 10.1073/pnas.2220014120. Epub 2023 May 30.
6
SpiDec: Computing binodals and interfacial tension of biomolecular condensates from simulations of spinodal decomposition.SpiDec:通过旋节线分解模拟计算生物分子凝聚物的双节线和界面张力
Front Mol Biosci. 2022 Oct 24;9:1021939. doi: 10.3389/fmolb.2022.1021939. eCollection 2022.
7
Multiscale Modeling of Protein-RNA Condensation in and Out of Equilibrium.蛋白质- RNA 凝聚的非平衡和平衡的多尺度建模。
Methods Mol Biol. 2023;2563:117-133. doi: 10.1007/978-1-0716-2663-4_5.
8
Calculating Binodals and Interfacial Tension of Phase-Separated Condensates from Molecular Simulations with Finite-Size Corrections.通过有限尺寸校正的分子模拟计算相分离凝聚物的双节线和界面张力
Methods Mol Biol. 2023;2563:1-35. doi: 10.1007/978-1-0716-2663-4_1.
9
Macromolecular Regulation of the Material Properties of Biomolecular Condensates.生物分子凝聚物材料特性的大分子调控
J Phys Chem Lett. 2022 Jun 8:5285-5290. doi: 10.1021/acs.jpclett.2c00824.
10
Multiphase organization is a second phase transition within multi-component biomolecular condensates.多相组织是多组分生物分子凝聚物中的第二相转变。
J Chem Phys. 2022 May 21;156(19):191104. doi: 10.1063/5.0088004.

本文引用的文献

1
Subcompartmentalization of polyampholyte species in organelle-like condensates is promoted by charge-pattern mismatch and strong excluded-volume interaction.两性聚电解质物种在细胞器样凝聚物中的亚区室化是由电荷模式不匹配和强烈的排除体积相互作用促进的。
Phys Rev E. 2021 Apr;103(4-1):042406. doi: 10.1103/PhysRevE.103.042406.
2
Simulation of FUS Protein Condensates with an Adapted Coarse-Grained Model.模拟 FUS 蛋白凝聚物的改进粗粒化模型。
J Chem Theory Comput. 2021 Jan 12;17(1):525-537. doi: 10.1021/acs.jctc.0c01064. Epub 2020 Dec 13.
3
Sequence dependent phase separation of protein-polynucleotide mixtures elucidated using molecular simulations.利用分子模拟阐明蛋白质-多核苷酸混合物的序列依赖相分离。
Nucleic Acids Res. 2020 Dec 16;48(22):12593-12603. doi: 10.1093/nar/gkaa1099.
4
Determinants for Fusion Speed of Biomolecular Droplets.生物分子液滴融合速度的决定因素。
Angew Chem Int Ed Engl. 2020 Nov 16;59(47):20837-20840. doi: 10.1002/anie.202006711. Epub 2020 Sep 8.
5
Phase transition of RNA-protein complexes into ordered hollow condensates.RNA-蛋白质复合物有序中空凝聚相的相变。
Proc Natl Acad Sci U S A. 2020 Jul 7;117(27):15650-15658. doi: 10.1073/pnas.1922365117. Epub 2020 Jun 22.
6
Interfacial properties of binary mixtures of simple fluids and their relation to the phase diagram.简单流体二元混合物的界面性质及其与相图的关系。
Phys Chem Chem Phys. 2020 Jun 14;22(22):12544-12564. doi: 10.1039/d0cp01411g. Epub 2020 May 26.
7
Tug of War between Condensate Phases in a Minimal Macromolecular System.在最小的高分子体系中凝聚相之间的拔河比赛。
J Am Chem Soc. 2020 May 13;142(19):8848-8861. doi: 10.1021/jacs.0c01881. Epub 2020 May 4.
8
LASSI: A lattice model for simulating phase transitions of multivalent proteins.LASSI:用于模拟多价蛋白相变的格点模型。
PLoS Comput Biol. 2019 Oct 21;15(10):e1007028. doi: 10.1371/journal.pcbi.1007028. eCollection 2019 Oct.
9
Three archetypical classes of macromolecular regulators of protein liquid-liquid phase separation.三种典型的大分子调控蛋白液-液相分离的类别。
Proc Natl Acad Sci U S A. 2019 Sep 24;116(39):19474-19483. doi: 10.1073/pnas.1907849116. Epub 2019 Sep 10.
10
Interfacial properties of binary Lennard-Jones mixtures by molecular simulation and density gradient theory.通过分子模拟和密度梯度理论研究二元 Lennard-Jones 混合物的界面性质。
J Chem Phys. 2019 May 7;150(17):174704. doi: 10.1063/1.5093603.

大分子调节剂对生物分子凝聚相的相平衡和界面张力具有匹配的影响。

Macromolecular regulators have matching effects on the phase equilibrium and interfacial tension of biomolecular condensates.

机构信息

Department of Physics, University of Illinois at Chicago, Chicago, Illinois, USA.

Department of Chemistry, University of Illinois at Chicago, Chicago, Illinois, USA.

出版信息

Protein Sci. 2021 Jul;30(7):1360-1370. doi: 10.1002/pro.4084. Epub 2021 Apr 24.

DOI:10.1002/pro.4084
PMID:33864415
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8197429/
Abstract

The interfacial tension of phase-separated biomolecular condensates affects their fusion and multiphase organization, and yet how this important property depends on the composition and interactions of the constituent macromolecules is poorly understood. Here we use molecular dynamics simulations to determine the interfacial tension and phase equilibrium of model condensate-forming systems. The model systems consist of binary mixtures of Lennard-Jones particles or chains of such particles. We refer to the two components as drivers and regulators; the former has stronger self-interactions and hence a higher critical temperature (T ) for phase separation. In previous work, we have shown that, depending on the relative strengths of driver-regulator and driver-driver interactions, regulators can either promote or suppress phase separation (i.e., increase or decrease T ). Here we find that the effects of regulators on T quantitatively match the effects on interfacial tension (γ). This important finding means that, when a condensate-forming system experiences a change in macromolecular composition or a change in intermolecular interactions (e.g., by mutation or posttranslational modification, or by variation in solvent conditions such as temperature, pH, or salt), the resulting change in T can be used to predict the change in γ and vice versa. We also report initial results showing that disparity in intermolecular interactions drives multiphase coexistence. These findings provide much needed guidance for understanding how biomolecular condensates mediate cellular functions.

摘要

相分离生物分子凝聚物的界面张力会影响它们的融合和多相组织,但人们对这一重要性质如何取决于组成大分子的成分和相互作用知之甚少。在这里,我们使用分子动力学模拟来确定模型凝聚形成系统的界面张力和相平衡。模型系统由 Lennard-Jones 粒子或此类粒子的链的二元混合物组成。我们将这两种成分称为驱动分子和调节分子;前者具有更强的自相互作用,因此具有更高的相分离临界温度(T)。在之前的工作中,我们已经表明,根据驱动分子-调节分子和驱动分子-驱动分子相互作用的相对强度,调节分子可以促进或抑制相分离(即增加或降低 T)。在这里,我们发现调节分子对 T 的影响与对界面张力(γ)的影响定量匹配。这一重要发现意味着,当一个凝聚形成系统经历大分子组成的变化或分子间相互作用的变化(例如,通过突变或翻译后修饰,或通过溶剂条件的变化,如温度、pH 值或盐度)时,T 的变化可以用来预测γ的变化,反之亦然。我们还报告了初步结果,表明分子间相互作用的差异导致多相共存。这些发现为理解生物分子凝聚物如何介导细胞功能提供了急需的指导。