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通过对庭荠属植物nrDNA分析揭示的镍超积累进化动力学

Evolutionary dynamics of nickel hyperaccumulation in Alyssum revealed by its nrDNA analysis.

作者信息

Mengoni A, Baker A J M, Bazzicalupo M, Reeves R D, Adigüzel N, Chianni E, Galardi F, Gabbrielli R, Gonnelli C

机构信息

Dipartimento di Biologia Animale e Genetica, Università di Firenze, via Romana 17-19, I-50125 Firenze, Italy.

School of Botany, The University of Melbourne, Melbourne, VIC 3010, Australia.

出版信息

New Phytol. 2003 Sep;159(3):691-699. doi: 10.1046/j.1469-8137.2003.00837.x.

DOI:10.1046/j.1469-8137.2003.00837.x
PMID:33873594
Abstract

•   Molecular phylogeny based on ribosomal internal transcribed spacer (ITS) sequences was studied to investigate the phyletic relationships among some nickel (Ni)-hyperaccumulating and nonhyperaccumulating species of the genus Alyssum in relation to their geographic distribution and Ni-hyperaccumulating phenotype. •   Thirty-seven samples belonging to 32 taxa were analysed by sequencing the polymerase chain reaction-amplified ITS region and performing neighbor joining, maximum parsimony and maximum likelihood phylogenetic analyses. •   The ITS region in the sampled species varied from 221 to 307 bp of ITS1 and from 194 to 251 bp of ITS2. A total of 765 characters was used to infer the phylogeny and the average nucleotide variation detected was 15.15%. •   Nickel-hyperaccumulation could have been lost or acquired independently more than once during the speciation of the genus. The geographical location of species could not be related to phylogenetic affinities.

摘要

• 基于核糖体内部转录间隔区(ITS)序列进行分子系统发育研究,以探究庭荠属一些镍(Ni)超积累和非超积累物种之间的系统发育关系,及其地理分布与镍超积累表型的关系。

• 通过对聚合酶链反应扩增的ITS区域进行测序,并进行邻接法、最大简约法和最大似然法系统发育分析,对属于32个分类单元的37个样本进行了分析。

• 所采样物种的ITS区域中,ITS1长度在221至307 bp之间,ITS2长度在194至251 bp之间。共使用765个字符来推断系统发育,检测到的平均核苷酸变异为15.15%。

• 在该属物种形成过程中,镍超积累特性可能不止一次地独立丧失或获得。物种的地理位置与系统发育亲缘关系无关。

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