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下一代测序技术在乙型肝炎诊断中的应用:现状与展望。

Next-generation sequencing for the diagnosis of hepatitis B: current status and future prospects.

机构信息

Liver Pathology Unit, Departments of Biochemistry and Microbiology, Hospital Universitari Vall d'Hebron, Universitat Autònoma De Barcelona, Barcelona Spain.

Clinical Biochemistry Research Group, Vall d'Hebron Institut Recerca (VHIR), Hospital Universitari Vall d'Hebron, Universitat Autònoma de Barcelona, Barcelona, Spain.

出版信息

Expert Rev Mol Diagn. 2021 Apr;21(4):381-396. doi: 10.1080/14737159.2021.1913055. Epub 2021 Apr 21.

DOI:10.1080/14737159.2021.1913055
PMID:33880971
Abstract

INTRODUCTION

Hepatitis B virus (HBV) causes a complex and persistent infection with a major impact on patients health. Viral-genome sequencing can provide valuable information for characterizing virus genotype, infection dynamics and drug and vaccine resistance.

AREAS COVERED

This article reviews the current literature to describe the next-generation sequencing progress that facilitated a more comprehensive study of HBV quasispecies in diagnosis and clinical monitoring.

EXPERT OPINION

HBV variability plays a key role in liver disease progression and treatment efficacy. Second-generation sequencing improved the sensitivity for detecting and quantifying mutations, mixed genotypes and viral recombination. Third-generation sequencing enables the analysis of the entire HBV genome, although the high error rate limits its use in clinical practice.

摘要

简介

乙型肝炎病毒(HBV)可引起复杂且持续的感染,对患者的健康有重大影响。病毒基因组测序可为病毒基因型、感染动态以及药物和疫苗耐药性的特征提供有价值的信息。

涵盖领域

本文综述了当前文献,描述了下一代测序技术的进展,这些进展促进了对 HBV 准种在诊断和临床监测中的更全面研究。

专家意见

HBV 的变异性在肝病进展和治疗效果中起着关键作用。第二代测序提高了检测和定量突变、混合基因型和病毒重组的灵敏度。第三代测序可分析整个 HBV 基因组,但高错误率限制了其在临床实践中的应用。

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引用本文的文献

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Int J Mol Sci. 2024 May 17;25(10):5481. doi: 10.3390/ijms25105481.
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The role of hepatitis B virus genome variations in HBV-related HCC: effects on host signaling pathways.乙型肝炎病毒基因组变异在HBV相关肝癌中的作用:对宿主信号通路的影响
Front Microbiol. 2023 Jul 31;14:1213145. doi: 10.3389/fmicb.2023.1213145. eCollection 2023.
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Hepatitis B Virus Variants with Multiple Insertions and/or Deletions in the X Open Reading Frame 3' End: Common Members of Viral Quasispecies in Chronic Hepatitis B Patients.
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Next-Generation Sequencing for Confronting Virus Pandemics.用于应对病毒大流行的下一代测序技术。
Viruses. 2022 Mar 14;14(3):600. doi: 10.3390/v14030600.
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Inspecting the Ribozyme Region of Hepatitis Delta Virus Genotype 1: Conservation and Variability.检测乙型肝炎 Delta 病毒 1 型的核酶区:保守性和变异性。
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