Hoffmann Timothy D, Reeksting Bianca J, Gebhard Susanne
Department of Biology and Biochemistry, Milner Centre for Evolution, University of Bath, Claverton Down, Bath, BA2 7AY, UK.
Microbiology (Reading). 2021 Apr;167(4). doi: 10.1099/mic.0.001049.
Micro-organisms contribute to Earth's mineral deposits through a process known as bacteria-induced mineral precipitation (BIMP). It is a complex phenomenon that can occur as a result of a variety of physiological activities that influence the supersaturation state and nucleation catalysis of mineral precipitation in the environment. There is a good understanding of BIMP induced by bacterial metabolism through the control of metal redox states and enzyme-mediated reactions such as ureolysis. However, other forms of BIMP often cannot be attributed to a single pathway but rather appear to be a passive result of bacterial activity, where minerals form as a result of metabolic by-products and surface interactions within the surrounding environment. BIMP from such processes has formed the basis of many new innovative biotechnologies, such as soil consolidation, heavy metal remediation, restoration of historic buildings and even self-healing concrete. However, these applications to date have primarily incorporated BIMP-capable bacteria sampled from the environment, while detailed investigations of the underpinning mechanisms have been lagging behind. This review covers our current mechanistic understanding of bacterial activities that indirectly influence BIMP and highlights the complexity and connectivity between the different cellular and metabolic processes involved. Ultimately, detailed insights will facilitate the rational design of application-specific BIMP technologies and deepen our understanding of how bacteria are shaping our world.
微生物通过一种称为细菌诱导矿物沉淀(BIMP)的过程促进了地球上的矿物沉积。这是一种复杂的现象,可能是由于各种生理活动导致的,这些生理活动会影响环境中矿物沉淀的过饱和状态和成核催化作用。通过控制金属氧化还原状态和酶介导的反应(如尿素分解),人们对细菌代谢诱导的BIMP有了很好的理解。然而,其他形式的BIMP往往不能归因于单一途径,而似乎是细菌活动的被动结果,即矿物是由代谢副产物和周围环境中的表面相互作用形成的。这种过程产生的BIMP构成了许多新型创新生物技术的基础,如土壤加固、重金属修复、历史建筑修复甚至自修复混凝土。然而,迄今为止,这些应用主要采用从环境中采集的具有BIMP能力的细菌,而对其潜在机制的详细研究却滞后了。这篇综述涵盖了我们目前对间接影响BIMP的细菌活动的机制理解,并强调了所涉及的不同细胞和代谢过程之间的复杂性和关联性。最终,详细的见解将有助于合理设计特定应用的BIMP技术,并加深我们对细菌如何塑造我们的世界的理解。