Yuan Hai-Yan, Lv Ya-Juan, Chen Yi, Li Dan, Li Xi, Qu Jian, Yan Han
Department of Pharmacy, The Second Xiangya Hospital, Central South University, Changsha 410011, People's Republic of China.
Department of Clinical Pharmacology, Xiangya Hospital, Central South University, Changsha 410008, People's Republic of China.
Open Life Sci. 2021 Apr 8;16(1):323-335. doi: 10.1515/biol-2021-0039. eCollection 2021.
TEA domain family members (TEADs) play important roles in tumor progression. Till now, the genomic status of in patients with glioma has not been well investigated. To confirm whether the genomic status of could affect the prognosis of patients with glioma, the copy number variation (CNV), mutation and expression data of glioma cohorts in The Cancer Genome Atlas, Gene Expression Omnibus and Chinese Glioma Genome Atlas were comprehensively analyzed. Results showed that CNV frequency in lower grade gliomas (LGGs) was higher than in glioblastoma multiforme (GBM). Multivariate cox regression analysis showed that CNV increase was significantly associated with overall survival (OS) and disease-free survival (DFS) in LGGs (OS = 0.022, HR = 1.444, 95% CI: 1.054-1.978; DFS = 0.005, HR = 1.485, 95% CI: 1.124-1.962), while not in GBM. Patients with CNV increase showed higher expression level of gene. In LGG patients with mutation, those with higher TEAD4 expression levels had shorter OS and DFS. Integrating CNV increase, mutations, mutation, mutation and 1p19q co-deletion would separate patients with LGG into four groups with significant differences in prognosis. These study results suggested that variations were independent predictive biomarkers for the prognosis in patients with LGG with mutation.
TEA结构域家族成员(TEADs)在肿瘤进展中发挥重要作用。到目前为止,胶质瘤患者中[未提及的基因]的基因组状态尚未得到充分研究。为了证实[未提及的基因]的基因组状态是否会影响胶质瘤患者的预后,对癌症基因组图谱、基因表达综合数据库和中国胶质瘤基因组图谱中胶质瘤队列的拷贝数变异(CNV)、突变和表达数据进行了综合分析。结果显示,低级别胶质瘤(LGGs)中[未提及的基因]的CNV频率高于多形性胶质母细胞瘤(GBM)。多变量cox回归分析显示,[未提及的基因]CNV增加与LGGs的总生存期(OS)和无病生存期(DFS)显著相关(OS P = 0.022,HR = 1.444,95%CI:1.054 - 1.978;DFS P = 0.005,HR = 1.485,95%CI:1.124 - 1.962),而在GBM中则不然。[未提及的基因]CNV增加的患者显示出[未提及的基因]基因的表达水平更高。在发生[未提及的基因]突变的LGG患者中,TEAD4表达水平较高的患者的OS和DFS较短。整合[未提及的基因]CNV增加、[未提及的基因]突变、[未提及的基因]突变、[未提及的基因]突变和1p19q共缺失将LGG患者分为四组,预后有显著差异。这些研究结果表明,[未提及的基因]变异是发生[未提及的基因]突变的LGG患者预后的独立预测生物标志物。