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临床可操作的发现源自于在医疗实践环境中提供的预测性基因组检测。

Clinically Actionable Findings Derived From Predictive Genomic Testing Offered in a Medical Practice Setting.

机构信息

Center for Individualized Medicine, Mayo Clinic, Rochester, MN.

Division of Biomedical Statistics and Informatics, Mayo Clinic, Rochester, MN.

出版信息

Mayo Clin Proc. 2021 Jun;96(6):1407-1417. doi: 10.1016/j.mayocp.2020.08.051. Epub 2020 Oct 21.

Abstract

OBJECTIVE

To assess the presence of clinically actionable results and other genetic findings in an otherwise healthy population of adults seen in a medical practice setting and offered "predictive" genomic testing.

PATIENTS AND METHODS

In 2014, a predictive genomics clinic for generally healthy adults was launched through the Mayo Clinic Executive Health Program. Self-identified interested patients met with a genomic nurse and genetic counselor for pretest advice and education. Two genome sequencing platforms and one gene panel-based health screen were offered. Posttest genetic counseling was available for patients who elected testing. From March 1, 2014, through June 1, 2019, 1281 patients were seen and 301 (23.5%) chose testing. Uptake rates increased to 36.3% [70 of 193]) in 2019 from 11.8% [2 of 17] in 2014. Clinically actionable results and genetic findings were analyzed using descriptive statistics.

RESULTS

Clinically actionable results were detected in 11.6% of patients (35 of 301), and of those, 51.7% (15 of 29) with a cancer or cardiovascular result = did not have a personal or family history concerning for a hereditary disorder. The most common actionable results were in the BCHE, BRCA2, CHEK2, LDLR, MUTYH, and MYH7 genes. A carrier of at least one recessive condition was found in 53.8% of patients (162 of 301). At least one variant associated with multifactorial disease was found in 44.5% (134 of 301) (eg, 25 patients were heterozygous for the F5 factor V Leiden variant associated with thrombophilia risk).

CONCLUSION

Our predictive screening revealed that 11.6% of individuals will test positive for a clinically actionable, likely pathogenic/pathogenic variant. This finding suggests that wider knowledge and adoption of predictive genomic services could be beneficial in medical practice, although additional studies are needed.

摘要

目的

评估在医疗实践环境中接受“预测性”基因组检测的健康成年人中存在的临床可操作结果和其他遗传发现。

患者和方法

2014 年,通过梅奥诊所行政保健计划推出了一个针对一般健康成年人的预测基因组学诊所。自我认定感兴趣的患者与基因组护士和遗传咨询师会面,获得测试前建议和教育。提供了两种基因组测序平台和一种基于基因面板的健康筛查。选择测试的患者可获得测试后的遗传咨询。从 2014 年 3 月 1 日至 2019 年 6 月 1 日,共 1281 名患者就诊,301 名(23.5%)患者选择了检测。2019 年的检测率从 2014 年的 11.8%[2/17]上升至 36.3%[70/193]。使用描述性统计方法分析临床可操作结果和遗传发现。

结果

在 301 名患者中检测到临床可操作结果 11.6%(35 例),其中 51.7%(15 例)患有癌症或心血管疾病,且无家族遗传病史。最常见的可操作结果是 BCHE、BRCA2、CHEK2、LDLR、MUTYH 和 MYH7 基因。在 301 名患者中发现至少有一名隐性疾病携带者 53.8%(162 例)。在 301 名患者中发现至少一种与多因素疾病相关的变体 44.5%(134 例)(例如,25 名患者为因子 V 莱顿变体杂合子,与血栓形成风险相关)。

结论

我们的预测性筛查显示,11.6%的个体将检测出具有临床可操作性的、可能致病性/致病性变异。这一发现表明,更广泛地了解和采用预测性基因组服务可能对医疗实践有益,尽管还需要进一步研究。

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