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温度、盐和脱落酸处理下Dof家族的全基因组分析及表达谱

Genome-Wide Analysis and Expression Profiles of the Dof Family in under Temperature, Salt and ABA Treatment.

作者信息

Wang Penglei, Yan Zhuanzhuan, Zong Xifang, Yan Qi, Zhang Jiyu

机构信息

The State Key Laboratory of Grassland Agro-Ecosystems, Key Laboratory of Grassland Livestock Industry Innovation, Ministry of Agriculture and Rural Affairs, College of Pastoral Agriculture Science and Technology, Lanzhou University, Lanzhou 730020, China.

出版信息

Plants (Basel). 2021 Apr 23;10(5):850. doi: 10.3390/plants10050850.

Abstract

The DNA-binding with one zinc finger () family of plant-specific transcription factors has a variety of important functions in gene transcriptional regulation, development, and stress responses. However, the structure and expression patterns of family have not been identified in , which is an important xerophytic and perennial gramineous grass in desert grassland. In this study, 50 genes were identified in and could be classified into four groups. According to genome-wide analysis, 46 of 50 genes were located on 20 chromosomes, and the gene structure and conserved protein motif of these proteins were analyzed. In addition, phylogenetic analysis of genes in , , , and estimated the evolutionary relationships, and these genes were grouped into seven clusters. Moreover, the expression profiles of these genes in were analyzed in response to high/low temperature, salinity, and ABA treatments. These results will provide valuable information for future studies on gene classification, cloning, and functional characterization of this family in .

摘要

具有一个锌指结构的植物特异性转录因子()家族在基因转录调控、发育及应激反应中具有多种重要功能。然而,在沙漠草原中一种重要的旱生多年生禾本科植物里,该家族的结构和表达模式尚未得到鉴定。在本研究中,从该植物中鉴定出50个基因,它们可分为四组。通过全基因组分析,50个基因中的4个位于20条染色体上,并对这些蛋白质的基因结构和保守蛋白基序进行了分析。此外,对该植物、、和中的基因进行系统发育分析,估计了它们的进化关系,这些基因被分为七个簇。而且,分析了这些基因在该植物中对高温/低温、盐度和脱落酸处理的表达谱。这些结果将为该植物中该家族基因分类、克隆及功能表征的未来研究提供有价值的信息。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a172/8146245/4a777762ebab/plants-10-00850-g001.jpg

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