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含CuS纳米团簇的铜(I)与L-半胱氨酸和氯离子的配合物的合成与结构

Synthesis and structure of a complex of copper(I) with l-cysteine and chloride ions containing CuS nanoclusters.

作者信息

Gizatullin Amir, Becker Jonathan, Islamov Daut, Serov Nikita, Schindler Siegfried, Klimovitskii Alexander, Shtyrlin Valery

机构信息

A. M. Butlerov Chemistry Institute, Kazan Federal University, Kremlevskaya St., 18, Kazan, 420008, Russian Federation.

Institute of Inorganic and Analytical Chemistry, Justus-Liebig University of Giessen, Heinrich-Buff Ring 17, D-35392 Giessen, Germany.

出版信息

Acta Crystallogr E Crystallogr Commun. 2021 Mar 2;77(Pt 4):324-330. doi: 10.1107/S2056989021002012. eCollection 2021 Apr 1.

DOI:10.1107/S2056989021002012
PMID:33936751
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8025850/
Abstract

The title hydrated copper(I)-l-cysteine-chloride complex has a polymeric structure of composition {[Cu(CysH)Cl]·HO} [CysH = HOCCH(NH )CHS or CHNOS], namely, poly[[tetra-μ-chlorido-deca-μ-chlorido-di-chlorido-hexa-kis-(μ-l-cysteinato)hexa-deca-copper] polyhydrate]. The copper atoms are linked by thiol-ate groups to form CuS nanoclusters that take the form of a tetra-kis cubocta-hedron, made up of a Cu cubo-octa-hedral subunit that is augmented by six sulfur atoms that are located symmetrically atop of each of the Cu square units of the Cu cubo-octa-hedron. The six S atoms thus form an octa-hedral subunit themselves. The exterior of the CuS sphere is decorated by chloride ions and trichlorocuprate units. Three chloride ions are coordinated in an irregular fashion to trigonal Cu subunits of the nanocluster, and four trigonal CuCl units are bonded each of their chloride ions to a copper ion on the CuS sphere. The trigonal CuCl units are linked CuCl bridges covalently connected to equivalent units in neighboring nanoclusters. Four such connections are arranged in a tetra-hedral fashion, thus creating an infinite diamond-like net of CuSCl(CuCl) nanoclusters. The network thus formed results in large channels occupied by solvent mol-ecules that are mostly too ill-defined to model. The content of the voids, believed to be water mol-ecules, was accounted for reverse Fourier-transform methods using the SQUEEZE algorithm [Spek (2015 ▸). C, 9-18]. The protonated amino groups of the cysteine ligands are directed away from the sphere, forming N-H⋯Cl hydrogen bonds with chloride-ion acceptors of their cluster. The protonated carb-oxy groups point outwards and presumably form O-H⋯O hydrogen bonds with the unresolved water mol-ecules of the solvent channels. Disorder is observed in one of the two crystallographically unique [Cu(CysH)Cl] segments for three of the six cysteine anions.

摘要

标题为水合氯化铜(I)-L-半胱氨酸配合物具有组成为{[Cu(CysH)Cl]·H₂O}的聚合物结构[CysH = HO₂CCH(NH₂)CH₂S 或 C₃H₇NO₂S],即聚[[四-μ-氯代-十-μ-氯代-二氯代-六-(μ-L-半胱氨酸根)十六铜]多水合物]。铜原子通过硫醇盐基团相连形成 CuS 纳米簇,其呈四-κ⁴-立方八面体形式,由一个 Cu 立方八面体亚基组成,该亚基由六个硫原子增强,这些硫原子对称地位于 Cu 立方八面体的每个 Cu 方形单元的顶部。因此,这六个 S 原子自身形成一个八面体亚基。CuS 球体的外部由氯离子和三氯铜酸盐单元修饰。三个氯离子以不规则方式配位到纳米簇的三角 Cu 亚基上,并且四个三角 CuCl 单元将它们的每个氯离子与 CuS 球体上的一个铜离子相连。三角 CuCl 单元通过 Cu-Cl 桥共价连接到相邻纳米簇中的等效单元。四个这样的连接以四面体方式排列,从而形成 CuSCl(CuCl)纳米簇的无限类金刚石网络。如此形成的网络导致形成大通道,溶剂分子占据这些通道,其大多定义不明确而无法建模。空隙的含量(据信为水分子)通过使用 SQUEEZE 算法的逆傅里叶变换方法进行计算[Spek(2015▸)。Acta Cryst. C,9 - 18]。半胱氨酸配体的质子化氨基指向远离球体的方向,与它们簇的氯离子受体形成 N-H⋯Cl 氢键。质子化的羧基向外指向,大概与溶剂通道中未解析的水分子形成 O-H⋯O 氢键。在两个晶体学上独特的[Cu(CysH)Cl]片段中的一个中,六个半胱氨酸阴离子中的三个观察到无序现象。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8756/8025850/9d583fb26fa2/e-77-00324-fig7.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8756/8025850/02d4577f079c/e-77-00324-fig1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8756/8025850/9e9b82d09413/e-77-00324-fig2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8756/8025850/29ba62e3cd49/e-77-00324-fig3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8756/8025850/aca6f76828b3/e-77-00324-fig4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8756/8025850/25e8eb121c33/e-77-00324-fig5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8756/8025850/5b9c880b0080/e-77-00324-fig6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8756/8025850/9d583fb26fa2/e-77-00324-fig7.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8756/8025850/02d4577f079c/e-77-00324-fig1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8756/8025850/9e9b82d09413/e-77-00324-fig2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8756/8025850/29ba62e3cd49/e-77-00324-fig3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8756/8025850/aca6f76828b3/e-77-00324-fig4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8756/8025850/25e8eb121c33/e-77-00324-fig5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8756/8025850/5b9c880b0080/e-77-00324-fig6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8756/8025850/9d583fb26fa2/e-77-00324-fig7.jpg

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