Department of Radiology, Tianjin Medical University Cancer Institute and Hospital, Tianjin, China.
National Clinical Research Center for Cancer, Tianjin, China.
Hum Brain Mapp. 2021 Aug 1;42(11):3470-3480. doi: 10.1002/hbm.25446. Epub 2021 May 3.
Working memory is a basic human cognitive function. However, the genetic signatures and their biological pathway remain poorly understood. In the present study, we tried to clarify this issue by exploring the potential associations and pathways among genetic variants, brain morphometry and working memory performance. We first carried out association analyses between 2-back accuracy and 212 image-derived phenotypes from 1141 Human Connectome Project (HCP) subjects using a linear mixed model (LMM). We found a significantly positive correlation between the left cuneus volume and 2-back accuracy (T = 3.615, p = 3.150e-4, Cohen's d = 0.226, corrected using family-wise error [FWE] method). Based on the LMM-based genome-wide association study (GWAS) on the HCP dataset and UK Biobank 33 k GWAS summary statistics, we identified eight independent single nucleotide polymorphisms (SNPs) that were reliably associated with left cuneus volume in both UKB and HCP dataset. Within the eight SNPs, we found a negative correlation between the rs76119478 polymorphism and 2-back accuracy accuracy (T = -2.045, p = .041, Cohen's d = -0.129). Finally, an LMM-based mediation analysis elucidated a significant effect of left cuneus volume in mediating rs76119478 polymorphism on the 2-back accuracy (indirect effect = -0.007, 95% BCa CI = [-0.045, -0.003]). These results were also replicated in a subgroup of Caucasians in the HCP population. Further fine mapping demonstrated that rs76119478 maps on intergene CTD-2315A10.2 adjacent to protein-encoding gene DAAM1, and is significantly associated with L3HYPDH mRNA expression. Our study suggested this new variant rs76119478 may regulate the working memory through exerting influence on the left cuneus volume.
工作记忆是人类的一种基本认知功能。然而,其遗传特征及其生物学途径仍知之甚少。在本研究中,我们试图通过探索遗传变异、大脑形态和工作记忆表现之间的潜在关联和途径来阐明这个问题。我们首先使用线性混合模型 (LMM) 对 1141 名人类连接组计划 (HCP) 受试者的 2 -back 准确率和 212 个基于图像的表型进行关联分析。我们发现左楔前叶体积与 2-back 准确率之间存在显著正相关 (T=3.615, p=3.150e-4, Cohen's d=0.226, 使用全基因组关联研究 [GWAS] 基于家族误差 [FWE] 方法校正)。基于 HCP 数据集和英国生物库 33 k GWAS 汇总统计数据的 LMM 全基因组关联研究 (GWAS),我们在 UKB 和 HCP 数据集都鉴定出与左楔前叶体积相关的八个独立的单核苷酸多态性 (SNP)。在这八个 SNP 中,我们发现 rs76119478 多态性与 2-back 准确率之间存在负相关 (T=-2.045, p=0.041, Cohen's d=-0.129)。最后,基于 LMM 的中介分析表明,左楔前叶体积在 rs76119478 多态性对 2-back 准确率的影响中具有显著的中介作用 (间接效应=-0.007, 95% BCa CI=[-0.045, -0.003])。这些结果在 HCP 人群中的白人群体亚组中得到了复制。进一步的精细映射表明,rs76119478 位于基因间 CTD-2315A10.2 上,紧邻编码蛋白 DAAM1 的基因,与 L3HYPDH mRNA 表达显著相关。我们的研究表明,这个新的变体 rs76119478 可能通过对左楔前叶体积的影响来调节工作记忆。