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Erratum: Neutron Spin Echo Spectroscopy as a Unique Probe for Lipid Membrane Dynamics and Membrane-Protein Interactions.勘误:中子自旋回波光谱法作为脂质膜动力学和膜-蛋白相互作用的独特探针。
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Incorporation of antimicrobial peptides into membranes: a combined liquid-state NMR and molecular dynamics study of alamethicin in DMPC/DHPC bicelles.抗菌肽融入膜的研究:关于缬氨霉素在二肉豆蔻酰磷脂酰胆碱/二氢胆酸二元混合胶束体系中的液态核磁共振与分子动力学联合研究
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Influence of lipid/peptide hydrophobic mismatch on the thickness of diacylphosphatidylcholine bilayers. A 2H NMR and ESR study using designed transmembrane alpha-helical peptides and gramicidin A.脂质/肽疏水错配对二酰基磷脂酰胆碱双层膜厚度的影响。一项使用设计的跨膜α-螺旋肽和短杆菌肽A的2H核磁共振和电子自旋共振研究。
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Intrinsic Lipid Curvature and Bilayer Elasticity as Regulators of Channel Function: A Comparative Single-Molecule Study.作为通道功能调节因子的内在脂质曲率和双层弹性:一项比较单分子研究
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A difference infrared spectroscopic study of gramicidin A, alamethicin and bacteriorhodopsin in perdeuterated dimyristoylphosphatidylcholine.在全氘代二肉豆蔻酰磷脂酰胆碱中短杆菌肽A、阿拉霉素和细菌视紫红质的差示红外光谱研究。
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本文引用的文献

1
Beyond structural models for the mode of action: How natural antimicrobial peptides affect lipid transport.超越作用模式的结构模型:天然抗菌肽如何影响脂质转运。
J Colloid Interface Sci. 2021 Jan 15;582(Pt B):793-802. doi: 10.1016/j.jcis.2020.08.094. Epub 2020 Aug 29.
2
Scaling relationships for the elastic moduli and viscosity of mixed lipid membranes.混合脂质膜弹性模量和黏度的标度关系。
Proc Natl Acad Sci U S A. 2020 Sep 22;117(38):23365-23373. doi: 10.1073/pnas.2008789117. Epub 2020 Sep 3.
3
Intercellular Receptor-Ligand Binding and Thermal Fluctuations Facilitate Receptor Aggregation in Adhering Membranes.细胞间受体-配体结合与热涨落促进黏附膜中受体聚集。
Nano Lett. 2020 Jan 8;20(1):722-728. doi: 10.1021/acs.nanolett.9b04596. Epub 2019 Dec 24.
4
On the Mechanism of Bilayer Separation by Extrusion, or Why Your LUVs Are Not Really Unilamellar.挤压导致双层分离的机制,或为何您的 LUVs 并非真正的单层囊泡。
Biophys J. 2019 Oct 15;117(8):1381-1386. doi: 10.1016/j.bpj.2019.09.006. Epub 2019 Sep 16.
5
Peptide-Induced Lipid Flip-Flop in Asymmetric Liposomes Measured by Small Angle Neutron Scattering.通过小角中子散射测量不对称脂质体中的肽诱导的脂质翻转。
Langmuir. 2019 Sep 10;35(36):11735-11744. doi: 10.1021/acs.langmuir.9b01625. Epub 2019 Aug 27.
6
Scaling of lipid membrane rigidity with domain area fraction.脂质膜刚性随域面积分数的标度。
Soft Matter. 2019 Apr 7;15(13):2762-2767. doi: 10.1039/c8sm02362j. Epub 2019 Feb 21.
7
Gramicidin Increases Lipid Flip-Flop in Symmetric and Asymmetric Lipid Vesicles.短杆菌肽增加对称和非对称脂质囊泡中的脂双层翻转。
Biophys J. 2019 Mar 5;116(5):860-873. doi: 10.1016/j.bpj.2019.01.016. Epub 2019 Jan 25.
8
Elastic behavior of model membranes with antimicrobial peptides depends on lipid specificity and d-enantiomers.模型膜中具有抗菌肽的弹性行为取决于脂质特异性和 D-对映异构体。
Soft Matter. 2019 Feb 20;15(8):1860-1868. doi: 10.1039/c8sm02180e.
9
Gramicidin Lateral Distribution in Phospholipid Membranes: Fluorescence Phasor Plots and Statistical Mechanical Model.革兰氏菌素在磷脂膜中的侧向分布:荧光相图和统计力学模型。
Int J Mol Sci. 2018 Nov 21;19(11):3690. doi: 10.3390/ijms19113690.
10
The lipid bilayer membrane and its protein constituents.脂质双层膜及其蛋白质成分。
J Gen Physiol. 2018 Nov 5;150(11):1472-1483. doi: 10.1085/jgp.201812153. Epub 2018 Sep 25.

含跨膜肽的脂质膜中的集体动力学。

Collective dynamics in lipid membranes containing transmembrane peptides.

作者信息

Kelley Elizabeth G, Butler Paul D, Nagao Michihiro

机构信息

NIST Center for Neutron Research, National Institute of Standards and Technology, Gaithersburg, MD, USA.

出版信息

Soft Matter. 2021 Jun 16;17(23):5671-5681. doi: 10.1039/d1sm00314c.

DOI:10.1039/d1sm00314c
PMID:33942045
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10466476/
Abstract

Biological membranes are composed of complex mixtures of lipids and proteins that influence each other's structure and function. The biological activities of many channel-forming peptides and proteins are known to depend on the material properties of the surrounding lipid bilayer. However, less is known about how membrane-spanning channels affect the lipid bilayer properties, and in particular, their collective fluctuation dynamics. Here we use neutron spin echo spectroscopy (NSE) to measure the collective bending and thickness fluctuation dynamics in dimyristoylphosphatidylcholine (di 14 : 0 PC, DMPC) lipid membranes containing two different antimicrobial peptides, alamethicin (Ala) and gramicidin (gD). Ala and gD are both well-studied antimicrobial peptides that form oligomeric membrane-spanning channels with different structures. At low concentrations, the peptides did not have a measurable effect on the average bilayer structure, yet significantly changed the collective membrane dynamics. Despite both peptides forming transmembrane channels, they had opposite effects on the relaxation time of the collective bending fluctuations and associated effective bending modulus, where gD addition stiffened the membrane while Ala addition softened the membrane. Meanwhile, the lowest gD concentrations enhanced the collective thickness fluctuation dynamics, while the higher gD concentrations and all studied Ala concentrations dampened these dynamics. The results highlight the synergy between lipids and proteins in determining the collective membrane dynamics and that not all peptides can be universally treated as rigid bodies when considering their effects on the lipid bilayer fluctuations.

摘要

生物膜由脂质和蛋白质的复杂混合物组成,这些成分相互影响彼此的结构和功能。已知许多形成通道的肽和蛋白质的生物活性取决于周围脂质双层的材料特性。然而,关于跨膜通道如何影响脂质双层特性,尤其是其集体波动动力学,人们了解得较少。在这里,我们使用中子自旋回波光谱(NSE)来测量含有两种不同抗菌肽(短杆菌肽A(Ala)和短杆菌肽(gD))的二肉豆蔻酰磷脂酰胆碱(di 14 : 0 PC,DMPC)脂质膜中的集体弯曲和厚度波动动力学。Ala和gD都是经过充分研究的抗菌肽,它们形成具有不同结构的寡聚跨膜通道。在低浓度下,这些肽对平均双层结构没有可测量的影响,但显著改变了集体膜动力学。尽管两种肽都形成跨膜通道,但它们对集体弯曲波动的弛豫时间和相关的有效弯曲模量有相反的影响,添加gD使膜变硬,而添加Ala使膜变软。同时,最低浓度的gD增强了集体厚度波动动力学,而较高浓度的gD和所有研究的Ala浓度则抑制了这些动力学。结果突出了脂质和蛋白质在决定集体膜动力学方面的协同作用,并且在考虑它们对脂质双层波动的影响时,并非所有肽都可以被普遍视为刚体。