Department of Biochemical Engineering and Biotechnology, Indian Institute of Technology Delhi, Hauz Khas, New Delhi 110016, India.
Biophys Chem. 2021 Aug;275:106604. doi: 10.1016/j.bpc.2021.106604. Epub 2021 Apr 28.
Charge transfer across membranes is an important problem in a wide variety of fundamental physicochemical and biological processes. Since Mitchell's concept of the ion well advanced in 1968, several models of ion translocation across biomembranes, for instance through the membrane-bound F portion of ATP synthase have been proposed. None of these models has considered the large desolvation free energy penalty of ~500 meV incurred in transferring a protonic charge from the aqueous phase into the membrane that hinders such charge transfer processes. The difficulty has been pointed out repeatedly. However, the problem of how the adverse ∆G barrier is overcome in order to enable rapid ion translocation in biomembranes has not been satisfactorily resolved. Hence the fact that the self-energy of the charges has been overlooked can be regarded as a main source of confusion in the field of bioenergetics. Further, in order to consider charges of a finite size (and not just point charges), the free energy of transferring the ions from water into a membrane phase of lower dielectric ε needs to be evaluated. Here a solution to the longstanding conundrum has been proposed by including the bound anion - the second ion in Nath's two-ion theory of energy coupling and ATP synthesis - in the free energy calculations. The mechanistic importance of the H - A charge pair in causing rotation and ATP synthesis by ion-protein interactions is highlighted. The ∆G calculations have been performed by using the Kirkwood-Tanford-Warshel (KTW) theory that takes into account the self-energies of the ions. The results show that the adverse ∆G can be almost exactly compensated by the sum of the electrostatic free energy of the charge-charge interactions and the dipole solvation energy for long-range ion pairs. Results of free energy compensation using the KTW theory have been compared with experimental data on the ∆G of ion pairs and shown to be in reasonable agreement. A general thermodynamic cycle for coupled ion transfer has been constructed to further elucidate facilitated ion permeation between water and membrane phases. Molecular interpretations of the results and their implications for various mechanisms of energy transduction have been discussed. We firmly believe that use of electrostatic theories such as the KTW theory that properly include the desolvation free energy penalty arising from the self-energy of the relevant ions are crucial for quantifying charge transfer processes in bioenergetics. Finally, the clear-cut implication is that proton-only and single-ion theories of ATP synthesis, such as the chemiosmotic theory, are grossly inadequate to comprehend energy storage and transduction in biological processes.
电荷跨膜转移是广泛的基础物理化学和生物过程中的一个重要问题。自 1968 年 Mitchell 提出离子阱的概念以来,已经提出了几种跨生物膜的离子迁移模型,例如通过膜结合的 ATP 合酶的 F 部分。这些模型都没有考虑到质子电荷从水相向膜内转移时产生的约 500meV 的巨大去溶剂化自由能罚分,这阻碍了这种电荷转移过程。这个困难已经被反复指出。然而,如何克服不利的 ∆G 障碍,以促进生物膜中的快速离子迁移的问题仍未得到满意解决。因此,电荷的自能被忽视可以被视为生物能量学领域混乱的主要来源。此外,为了考虑有限大小的电荷(而不仅仅是点电荷),需要评估将离子从水中转移到介电常数较低的膜相的自由能。在这里,通过将 Nath 的二离子理论的能量偶联和 ATP 合成中的第二个离子——结合阴离子包含在自由能计算中,提出了一个长期存在的难题的解决方案。突出了 H-A 电荷对通过离子-蛋白质相互作用引起旋转和 ATP 合成的机械重要性。通过使用 Kirkwood-Tanford-Warshel (KTW) 理论进行的 ∆G 计算考虑了离子的自能。结果表明,不利的 ∆G 可以通过电荷-电荷相互作用的静电自由能和长程离子对的偶极溶剂化能的总和几乎完全补偿。使用 KTW 理论进行自由能补偿的结果与离子对的 ∆G 的实验数据进行了比较,并显示出合理的一致性。构建了耦合离子转移的一般热力学循环,以进一步阐明水相与膜相之间促进的离子渗透。讨论了对结果的分子解释及其对各种能量转导机制的影响。我们坚信,使用静电理论,如 KTW 理论,正确地包括与相关离子的自能相关的去溶剂化自由能罚分,对于量化生物能量学中的电荷转移过程至关重要。最后,明确的含义是,质子唯和单离子的 ATP 合成理论,如化学渗透理论,严重不足以理解生物过程中的能量储存和转导。