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内共生细菌“虱内利氏菌”的全基因组序列

Complete Genome Sequence of the Endosymbiotic Bacterium " Riesia pediculicola".

作者信息

Park Jongsun, Lee Si Hyeock, Kim Ju Hyeon

机构信息

InfoBoss, Inc., Gangnam-gu, Seoul, Republic of Korea

InfoBoss Research Center, Gangnam-gu, Seoul, Republic of Korea.

出版信息

Microbiol Resour Announc. 2021 May 6;10(18):e01181-20. doi: 10.1128/MRA.01181-20.

Abstract

Human head and body lice host the obligate endosymbiotic bacterium " Riesia pediculicola." In this announcement, we describe the complete genome sequence of a " Riesia pediculicola" strain isolated from the human head louse, subsp. The inter- and intraspecific variations of endosymbiont genomes were investigated, and this strain was found to display high-level variations in its genome.

摘要

人头虱和人体虱携带专性内共生细菌“人虱里氏菌”。在本报告中,我们描述了从人头虱中分离出的人虱里氏菌菌株亚种的完整基因组序列。我们研究了内共生菌基因组的种间和种内变异,发现该菌株在其基因组中表现出高水平变异。

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The complete mitochondrial genome of Glover, 1877 (Hemiptera: Aphididae) isolated from in Korea.
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2
The complete mitochondrial genome of Glover, 1877 (Hemiptera: Aphididae) collected in Korean peninsula.
Mitochondrial DNA B Resour. 2019 Sep 13;4(2):3007-3009. doi: 10.1080/23802359.2019.1666051.
3
NCBI prokaryotic genome annotation pipeline.
Nucleic Acids Res. 2016 Aug 19;44(14):6614-24. doi: 10.1093/nar/gkw569. Epub 2016 Jun 24.
4
Trimmomatic: a flexible trimmer for Illumina sequence data.
Bioinformatics. 2014 Aug 1;30(15):2114-20. doi: 10.1093/bioinformatics/btu170. Epub 2014 Apr 1.
5
MAFFT multiple sequence alignment software version 7: improvements in performance and usability.
Mol Biol Evol. 2013 Apr;30(4):772-80. doi: 10.1093/molbev/mst010. Epub 2013 Jan 16.
6
Optimizing de novo transcriptome assembly from short-read RNA-Seq data: a comparative study.
BMC Bioinformatics. 2011 Dec 14;12 Suppl 14(Suppl 14):S2. doi: 10.1186/1471-2105-12-S14-S2.
7
Genome sequences of the human body louse and its primary endosymbiont provide insights into the permanent parasitic lifestyle.
Proc Natl Acad Sci U S A. 2010 Jul 6;107(27):12168-73. doi: 10.1073/pnas.1003379107. Epub 2010 Jun 21.
8
The Sequence Alignment/Map format and SAMtools.
Bioinformatics. 2009 Aug 15;25(16):2078-9. doi: 10.1093/bioinformatics/btp352. Epub 2009 Jun 8.
9
Velvet: algorithms for de novo short read assembly using de Bruijn graphs.
Genome Res. 2008 May;18(5):821-9. doi: 10.1101/gr.074492.107. Epub 2008 Mar 18.

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