Department of Bioinformatics & Computational Biology, Genentech, Inc., South San Francisco, CA 94080, USA.
Department of Oncology Biomarker Development, Genentech, Inc., South San Francisco, CA 94080, USA.
Cancer Cell. 2021 Jul 12;39(7):928-944.e6. doi: 10.1016/j.ccell.2021.04.004. Epub 2021 May 6.
Distinct T cell infiltration patterns, i.e., immune infiltrated, excluded, and desert, result in different responses to cancer immunotherapies. However, the key determinants and biology underpinning these tumor immune phenotypes remain elusive. Here, we provide a high-resolution dissection of the entire tumor ecosystem through single-cell RNA-sequencing analysis of 15 ovarian tumors. Immune-desert tumors are characterized by unique tumor cell-intrinsic features, including metabolic pathways and low antigen presentation, and an enrichment of monocytes and immature macrophages. Immune-infiltrated and -excluded tumors differ markedly in their T cell composition and fibroblast subsets. Furthermore, our study reveals chemokine receptor-ligand interactions within and across compartments as potential mechanisms mediating immune cell infiltration, exemplified by the tumor cell-T cell cross talk via CXCL16-CXCR6 and stromal-immune cell cross talk via CXCL12/14-CXCR4. Our data highlight potential molecular mechanisms that shape the tumor immune phenotypes and may inform therapeutic strategies to improve clinical benefit from cancer immunotherapies.
不同的 T 细胞浸润模式,即免疫浸润、排除和荒漠,导致对癌症免疫疗法的不同反应。然而,这些肿瘤免疫表型背后的关键决定因素和生物学机制仍难以捉摸。在这里,我们通过对 15 个卵巢肿瘤的单细胞 RNA 测序分析,提供了对整个肿瘤生态系统的高分辨率剖析。免疫荒漠型肿瘤具有独特的肿瘤细胞内在特征,包括代谢途径和低抗原呈递,以及单核细胞和不成熟巨噬细胞的富集。免疫浸润型和排除型肿瘤在 T 细胞组成和成纤维细胞亚群上有明显差异。此外,我们的研究揭示了趋化因子受体-配体相互作用在肿瘤内和肿瘤间的潜在机制,这些机制可能介导免疫细胞浸润,例如肿瘤细胞与 T 细胞之间通过 CXCL16-CXCR6 的相互作用以及基质-免疫细胞之间通过 CXCL12/14-CXCR4 的相互作用。我们的数据强调了可能塑造肿瘤免疫表型的潜在分子机制,并可能为改善癌症免疫疗法的临床获益提供治疗策略。