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基因组范围内鉴定麻疯树 bZIP 转录因子及其对干旱和盐胁迫的表达模式。

Genome-wide characterization of bZIP transcription factors and their expression patterns in response to drought and salinity stress in Jatropha curcas.

机构信息

College of Life Sciences, Hefei Normal University, Hefei 230601, China; Co-Innovation Center for Sustainable Forestry in Southern China, Nanjing Forestry University, Nanjing 210037, China.

College of Life Sciences, Hefei Normal University, Hefei 230601, China.

出版信息

Int J Biol Macromol. 2021 Jun 30;181:1207-1223. doi: 10.1016/j.ijbiomac.2021.05.027. Epub 2021 May 8.

DOI:10.1016/j.ijbiomac.2021.05.027
PMID:33971233
Abstract

The basic leucine zipper (bZIP) family is one of the largest families of transcription factors (TFs) in plants and is responsible for various functions, including regulating development and responses to abiotic/biotic stresses. However, the roles of bZIPs in the regulation of responses to drought stress and salinity stress remain poorly understood in Jatropha curcas L., a biodiesel crop. In the present study, 50 JcbZIP genes were identified and classified into ten groups. Cis-element analysis indicated that JcbZIP genes are associated with abiotic stress. Gene expression patterns and quantitative real-time PCR (qRT-PCR) showed that four JcbZIP genes (JcbZIPs 34, 36, 49 and 50) are key resistance-related genes under both drought and salinity stress conditions. On the basis of the results of cis-element and phylogenetic analyses, JcbZIP49 and JcbZIP50 are likely involved in responses to drought and salinity stress; moreover, JcbZIP34 and JcbZIP36 might also play important roles in seed development and response to abiotic stress. These findings advance our understanding of the comprehensive characteristics of JcbZIP genes and provide new insights for functional validation in the further.

摘要

碱性亮氨酸拉链(bZIP)家族是植物中转录因子(TFs)最大的家族之一,负责各种功能,包括调节发育和对非生物/生物胁迫的反应。然而,在生物柴油作物麻疯树(Jatropha curcas L.)中,bZIPs 在调节对干旱胁迫和盐胁迫的反应中的作用仍知之甚少。本研究鉴定了 50 个 JcbZIP 基因,并将其分为 10 组。顺式元件分析表明,JcbZIP 基因与非生物胁迫有关。基因表达模式和定量实时 PCR(qRT-PCR)显示,在干旱和盐胁迫条件下,四个 JcbZIP 基因(JcbZIPs 34、36、49 和 50)是关键的抗性相关基因。基于顺式元件和系统发育分析的结果,JcbZIP49 和 JcbZIP50 可能参与了对干旱和盐胁迫的反应;此外,JcbZIP34 和 JcbZIP36 也可能在种子发育和对非生物胁迫的反应中发挥重要作用。这些发现增进了我们对 JcbZIP 基因综合特征的理解,并为进一步的功能验证提供了新的见解。

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