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用于两种北极繁殖海鸟的 ToxChip PCR 基因芯片:区域环境评估的应用。

ToxChip PCR Arrays for Two Arctic-Breeding Seabirds: Applications for Regional Environmental Assessments.

机构信息

Science and Technology Branch, Environment and Climate Change Canada, Ottawa, ON K1A 0H3, Canada.

Department of Biology, Queen's University, Kingston, ON K7L 3N6, Canada.

出版信息

Environ Sci Technol. 2021 Jun 1;55(11):7521-7530. doi: 10.1021/acs.est.1c00229. Epub 2021 May 13.

Abstract

Increasing pollution in the Arctic poses challenges in terms of geographical and ecological monitoring. The Baffin Bay-Davis Strait (BBDS) region in the Canadian Arctic Archipelago is of particular concern due to the potential for increased shipping traffic and oil exploration. However, data on background contaminants associated with oil exploration/spills/natural seeps (e.g., polycyclic aromatic compounds [PAC]) and measures of potential effects for Arctic birds are limited. We developed a toxicogenomics approach to investigate the background gene expression profiles for two Arctic-breeding seabirds, the thick-billed murre () and the black guillemot (), which will aid effects-based monitoring efforts. Chemical burdens (53 PACs and 5 trace elements) and transcriptomic profiles (31 genes using a ToxChip PCR array) were examined in liver tissues ( = 30) of each species collected from the Qaqulluit and Akpait National Wildlife Areas in the BBDS region. While chemical and transcriptomic profiles demonstrated low variability across individuals for each species, gene expression signatures were able to distinguish guillemots collected from two distinct colonies. This toxicogenomics approach provides benchmark data for two Arctic seabirds and is promising for future monitoring efforts and strategic environmental assessments in this sensitive ecosystem and areas elsewhere in the circumpolar Arctic that are undergoing change.

摘要

北极地区污染的增加给地理和生态监测带来了挑战。加拿大北极群岛的巴芬湾-戴维斯海峡(BBDS)地区尤其令人担忧,因为该地区可能会增加航运交通和石油勘探。然而,与石油勘探/泄漏/自然渗漏有关的背景污染物数据(例如多环芳烃[PAC])以及北极鸟类潜在影响的测量数据非常有限。我们开发了一种毒理基因组学方法来研究两种在北极繁殖的海鸟——厚嘴海雀()和黑海鸥()的背景基因表达谱,这将有助于基于影响的监测工作。在 BBDS 地区的 Qaqulluit 和 Akpait 国家野生动物保护区采集的每个物种的肝脏组织(=30)中,检查了化学负荷(53 种多环芳烃和 5 种微量元素)和转录组谱(使用 ToxChip PCR 阵列的 31 个基因)。虽然每种物种的个体之间的化学和转录组谱显示出低变异性,但基因表达特征能够区分来自两个不同栖息地的黑海鸥。这种毒理基因组学方法为两种北极海鸟提供了基准数据,并且有望在这个敏感的生态系统和其他正在发生变化的环极北极地区的未来监测工作和战略环境评估中得到应用。

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