Neckovic Ana, van Oorschot Roland A H, Szkuta Bianca, Durdle Annalisa
School of Life and Environmental Sciences, Deakin University, Geelong, Australia.
Office of the Chief Forensic Scientist, Victoria Police Forensic Services Centre, Macleod, Australia; School of Molecular Sciences, La Trobe University, Bundoora, Australia.
Sci Justice. 2021 May;61(3):280-290. doi: 10.1016/j.scijus.2021.01.001. Epub 2021 Jan 7.
16S rRNA profiling of bacterial communities may have forensic utility in the identification or association of individuals involved with criminal activities. Microbial profiling of evidence may, in the future, be performed within environments currently utilised for human DNA recovery, such as a forensic biology laboratory. It would be important to establish the background microbiome of such an environment to determine the potential presence of human or environmental microbial signatures to assist forensic scientists in the appropriate interpretation of target microbial communities. This study sampled various surfaces of an Evidence Recovery Laboratory (ERL) on three occasions including (a) before a monthly deep-clean, (b) immediately following the deep-clean, and (c) immediately after the laboratory's use by a single participant for the purposes of routine item examinations. Microbial profiles were also generated for the involved participant and researcher for comparison purposes. Additionally, human nuclear DNA was profiled for each of the samples collected, using standard forensic profiling techniques, to provide a prospective link to the presence or absence of a background microbial signature within the ERL after its use. Taxonomic distributions across ERL samples revealed no consistent signature of any of the items sampled over time, however, major phyla noted within all ERL samples across the three timepoints were consistent with those found in human skin microbiomes. PCoA plots based on the Unweighted Unifrac metric revealed some clustering between participant microbial reference samples and surfaces of the ERL after use, suggesting that despite a lack of direct contact, and adherence to standard operating procedures (SOPs) suitable for human DNA recovery, microbiomes may be deposited into a forensic setting over time. The reference samples collected from the involved participant and researcher generated full STR profiles. Human DNA was observed to varying degrees in samples taken from the ERL across each of the sampling timepoints. There was no correlation observed between samples that contained or did not contain detectable quantities of human nuclear DNA and microbial profile outputs.
细菌群落的16S rRNA分析在识别或关联参与犯罪活动的个体方面可能具有法医学用途。未来,证据的微生物分析可能会在目前用于人类DNA提取的环境中进行,比如法医生物学实验室。确定这样一个环境的背景微生物组很重要,以便确定人类或环境微生物特征的潜在存在,从而帮助法医科学家正确解释目标微生物群落。本研究对一个证据回收实验室(ERL)的各种表面进行了三次采样,包括(a)每月深度清洁前,(b)深度清洁后立即采样,以及(c)一名参与者为进行常规物品检查而使用该实验室后立即采样。还对相关参与者和研究人员进行了微生物分析以作比较。此外,使用标准法医分析技术对采集的每个样本进行人类核DNA分析,以便前瞻性地了解ERL在使用后是否存在背景微生物特征。ERL样本的分类分布显示,随着时间推移,所采样的任何物品均无一致的特征,然而,在三个时间点的所有ERL样本中发现的主要门类与人类皮肤微生物组中的门类一致。基于非加权UniFrac度量的主坐标分析图显示,参与者微生物参考样本与使用后的ERL表面之间存在一些聚类,这表明尽管缺乏直接接触,且遵守了适合人类DNA提取的标准操作程序(SOP),但随着时间推移,微生物群落可能会沉积到法医环境中。从相关参与者和研究人员那里采集的参考样本生成了完整的STR图谱。在每个采样时间点从ERL采集的样本中均不同程度地检测到了人类DNA。在含有或不含可检测量人类核DNA的样本与微生物分析结果之间未观察到相关性。