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粪厌氧球菌属新种,从猪粪便中分离得到。

Anaerococcus faecalis sp. nov., Isolated from Swine Faeces.

机构信息

Korean Collection for Type Cultures, Biological Resource Center, Korea Research Institute of Bioscience and Biotechnology, Jeongeup, 56212, Republic of Korea.

Korean Bioinformation Center, Korea Research Institute of Bioscience and Biotechnology, Daejeon, 34141, Republic of Korea.

出版信息

Curr Microbiol. 2021 Jul;78(7):2589-2594. doi: 10.1007/s00284-021-02497-7. Epub 2021 May 13.

Abstract

An obligate anaerobic, Gram-stain-positive, non-spore forming, non-motile, catalase and oxidase-negative, coccoid-shaped bacterium designated AGMB00486 was isolated from swine faeces. The optimal growth of the isolate occurred at pH 8.0 and 37 ℃. Furthermore, the growth was observed in the presence of up to 4% (w/v) NaCl but not at salinity levels higher than 5%. The phylogenetic analysis based on the 16S rRNA gene sequences revealed that strain AGMB00486 was a member of the genus Anaerococcus and that the isolate was most closely related to Anaerococcus vaginalis KCTC 15028 (96.7% 16S rRNA gene sequence similarity) followed by Anaerococcus hydrogenalis KCTC 15014 (96.7%) and Anaerococcus senegalensis KCTC 15435 (96.3%). Whole-genome sequence analysis determined that the DNA G+C content of strain AGMB00486 was 30.1 mol%, and the genome size, numbers of tRNA and rRNA genes were 2,268,866 bp, 47 and 8, respectively. The average nucleotide identity values between strain AGMB00486 and the three related type strains were 77.0, 77.4 and 77.2%, respectively. The major cellular fatty acids (> 10%) of strain AGMB00486 were C, C and C DMA. Accordingly, these distinct phenotypic and phylogenetic properties revealed that strain AGMB00486 represents a novel species, for which the name Anaerococcus faecalis sp. nov. is proposed. The type strain is AGMB00486 (= KCTC 15945 = CCTCC AB 202009).

摘要

从猪粪便中分离到一株严格厌氧菌,革兰氏阳性,不产芽孢,不运动,接触酶和氧化酶阴性,呈球形的细菌,命名为 AGMB00486。该分离株的最佳生长条件为 pH8.0 和 37℃。此外,在高达 4%(w/v)NaCl 的存在下可以观察到生长,但在高于 5%的盐度下则不能生长。基于 16S rRNA 基因序列的系统发育分析表明,菌株 AGMB00486 是 Anaerococcus 属的成员,与 Anaerococcus vaginalis KCTC 15028(96.7% 16S rRNA 基因序列相似性)最为密切相关,其次是 Anaerococcus hydrogenalis KCTC 15014(96.7%)和 Anaerococcus senegalensis KCTC 15435(96.3%)。全基因组序列分析确定菌株 AGMB00486 的 DNA G+C 含量为 30.1mol%,基因组大小、tRNA 和 rRNA 基因数量分别为 2,268,866bp、47 和 8 个。菌株 AGMB00486 与 3 株相关模式菌株的平均核苷酸同一性值分别为 77.0、77.4 和 77.2%。菌株 AGMB00486 的主要细胞脂肪酸(>10%)为 C16:0、C16:1ω7c 和 C DMA。因此,这些明显的表型和系统发育特性表明,菌株 AGMB00486 代表一个新种,提议命名为 Anaerococcus faecalis sp. nov.。模式菌株为 AGMB00486(=KCTC 15945=CCTCC AB 202009)。

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