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猪小弯肠菌属,新属,新种,是从猪的小肠中分离到的埃里希氏菌科的一个新成员。

Intestinibaculum porci gen. nov., sp. nov., a new member of the family Erysipelotrichaceae isolated from the small intestine of a swine.

机构信息

Korean Collection for Type Cultures, Biological Resource Center, Korea Research Institute of Bioscience and Biotechnology, Jeongeup, 56212, Republic of Korea.

Division of Polar Life Sciences, Korea Polar Research Institute, Incheon, 21990, Republic of Korea.

出版信息

J Microbiol. 2019 May;57(5):381-387. doi: 10.1007/s12275-019-8631-8. Epub 2019 Feb 22.

Abstract

A strictly anaerobic, Gram-stain-positive, catalase-negative, non-motile, rod-shaped bacterium, designated SG0102, was isolated from the small intestine of a swine. Optimal growth occurred at 37°C and pH 7.0. Furthermore, growth was observed in the presence of up to 3% (w/v) NaCl but not at salinity levels higher than 4%. The comparative analysis of 16S rRNA gene sequences showed that strain SG0102 was most closely related to Kandleria vitulina DSM 20405 (93.3%), followed by Catenibacterium mitsuokai KCTC 5053 (91.1%), Sharpea azabuensis KCTC 15217 (91.0%), and Eggerthia catenaformis DSM 5348 (89.6%). The average nucleotide identity values between strain SG0102 and related species, K. vitulina DSM 20405, C. mitsuokai KCTC 5053, S. azabuensis KCTC 15217, and E. catenaformis DSM 5348, were 71.0, 69.3, 70.0, and 69.2%, respectively. The phylogenetic analysis based on 16S rRNA gene sequence revealed that strain SG0102 belonged to the family Erysipelotrichaceae in the class Erysipelotrichia. The DNA G + C content of the strain SG0102 was 39.5 mol%. The major cellular fatty acids (> 10%) of strain SG0102 were C, C dimethyl acetal, and Cω The cell wall peptidoglycan of strain SG0102 contained the meso-diaminopimelic acid. The strain SG0102 produced lactic acid as a major end product of fermentation. These distinct phenotypic and phylogenetic properties suggest that strain SG0102 represents a novel species in a novel genus of the family Erysipelotrichaceae, for which the name Intestinibaculum porci gen. nov. sp. nov. is proposed. The type strain is SG0102 (= KCTC 15725 = NBRC 113396).

摘要

一株严格厌氧、革兰氏阳性、过氧化氢酶阴性、非运动、杆状的细菌,被命名为 SG0102,从猪的小肠中分离得到。最佳生长温度为 37°C,pH 值为 7.0。此外,在高达 3%(w/v)的 NaCl 存在下可以观察到生长,但在高于 4%的盐度水平下则不能生长。16S rRNA 基因序列的比较分析表明,菌株 SG0102与 Kandleria vitulina DSM 20405(93.3%)最为密切相关,其次是 Catenibacterium mitsuokai KCTC 5053(91.1%)、Sharpea azabuensis KCTC 15217(91.0%)和 Eggerthia catenaformis DSM 5348(89.6%)。菌株 SG0102 与相关种 Kandleria vitulina DSM 20405、Catenibacterium mitsuokai KCTC 5053、Sharpea azabuensis KCTC 15217 和 Eggerthia catenaformis DSM 5348 的平均核苷酸同一性值分别为 71.0%、69.3%、70.0%和 69.2%。基于 16S rRNA 基因序列的系统发育分析表明,菌株 SG0102 属于 Erysipelotrichaceae 科的 Erysipelotrichia 纲。菌株 SG0102 的 DNA G+C 含量为 39.5mol%。菌株 SG0102 的主要细胞脂肪酸(>10%)为 C、C 二甲基缩醛和 Cω。菌株 SG0102 的细胞壁肽聚糖含有 meso-二氨基庚二酸。菌株 SG0102 产生乳酸作为发酵的主要终产物。这些独特的表型和系统发育特性表明,菌株 SG0102 代表 Erysipelotrichaceae 科的一个新属中的一个新种,因此建议将其命名为 Intestinibaculum porci gen. nov. sp. nov.。模式菌株为 SG0102(=KCTC 15725=NBRC 113396)。

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