Department of Human Behavior, Ecology and Culture, Max Planck Institute for Evolutionary Anthropology, Deutscher Platz 6, 04103 Leipzig, Germany.
Department of Integrative Biology, Oklahoma State University, Stillwater, OK 74078, USA.
Philos Trans R Soc Lond B Biol Sci. 2021 Jul 5;376(1828):20200057. doi: 10.1098/rstb.2020.0057. Epub 2021 May 17.
Phylogenetic analyses increasingly take centre-stage in our understanding of the processes shaping patterns of cultural diversity and cultural evolution over time. Just as biologists explain the origins and maintenance of trait differences among organisms using phylogenetic methods, so anthropologists studying cultural macroevolutionary processes use phylogenetic methods to uncover the history of human populations and the dynamics of culturally transmitted traits. In this paper, we revisit concerns with the validity of these methods. Specifically, we use simulations to reveal how properties of the sample (size, missing data), properties of the tree (shape) and properties of the traits (rate of change, number of variants, transmission mode) might influence the inferences that can be drawn about trait distributions across a given phylogeny and the power to discern alternative histories. Our approach shows that in two example datasets specific combinations of properties of the sample, of the tree and of the trait can lead to potentially high rates of Type I and Type II errors. We offer this simulation tool to help assess the potential impact of this list of persistent perils in future cultural macroevolutionary work. This article is part of the theme issue 'Foundations of cultural evolution'.
系统发育分析在我们理解文化多样性和文化进化随时间演变的过程中日益占据中心地位。正如生物学家使用系统发育方法来解释生物之间特征差异的起源和维持一样,研究文化宏观进化过程的人类学家也使用系统发育方法来揭示人类群体的历史和文化传播特征的动态。在本文中,我们重新审视了这些方法的有效性问题。具体来说,我们使用模拟来揭示样本(大小、缺失数据)、树(形状)和特征(变化率、变体数量、传播模式)的特性如何影响给定系统发育树上特征分布的推断,以及辨别替代历史的能力。我们的方法表明,在两个示例数据集,样本、树和特征的特定组合可能导致潜在的高Ⅰ型和Ⅱ型错误率。我们提供这个模拟工具,以帮助评估这个持久的潜在危险列表在未来文化宏观进化工作中的潜在影响。本文是主题为“文化进化基础”的特刊的一部分。