Simeão Rosangela M, Resende Marcos D V, Alves Rodrigo S, Pessoa-Filho Marco, Azevedo Ana Luisa S, Jones Chris S, Pereira Jorge F, Machado Juarez C
Embrapa Gado de Corte, Campo Grande, Brazil.
Embrapa Café, Universidade Federal de Viçosa, Viçosa, Brazil.
Front Plant Sci. 2021 Apr 30;12:665195. doi: 10.3389/fpls.2021.665195. eCollection 2021.
The world population is expected to be larger and wealthier over the next few decades and will require more animal products, such as milk and beef. Tropical regions have great potential to meet this growing global demand, where pasturelands play a major role in supporting increased animal production. Better forage is required in consonance with improved sustainability as the planted area should not increase and larger areas cultivated with one or a few forage species should be avoided. Although, conventional tropical forage breeding has successfully released well-adapted and high-yielding cultivars over the last few decades, genetic gains from these programs have been low in view of the growing food demand worldwide. To guarantee their future impact on livestock production, breeding programs should leverage genotyping, phenotyping, and envirotyping strategies to increase genetic gains. Genomic selection (GS) and genome-wide association studies play a primary role in this process, with the advantage of increasing genetic gain due to greater selection accuracy, reduced cycle time, and increased number of individuals that can be evaluated. This strategy provides solutions to bottlenecks faced by conventional breeding methods, including long breeding cycles and difficulties to evaluate complex traits. Initial results from implementing GS in tropical forage grasses (TFGs) are promising with notable improvements over phenotypic selection alone. However, the practical impact of GS in TFG breeding programs remains unclear. The development of appropriately sized training populations is essential for the evaluation and validation of selection markers based on estimated breeding values. Large panels of single-nucleotide polymorphism markers in different tropical forage species are required for multiple application targets at a reduced cost. In this context, this review highlights the current challenges, achievements, availability, and development of genomic resources and statistical methods for the implementation of GS in TFGs. Additionally, the prediction accuracies from recent experiments and the potential to harness diversity from genebanks are discussed. Although, GS in TFGs is still incipient, the advances in genomic tools and statistical models will speed up its implementation in the foreseeable future. All TFG breeding programs should be prepared for these changes.
预计在未来几十年里,世界人口将更多且更富裕,对牛奶和牛肉等动物产品的需求也会增加。热带地区有很大潜力满足全球这一日益增长的需求,在这些地区,牧场在支持动物产量增加方面发挥着重要作用。鉴于种植面积不应增加且应避免大面积种植一种或几种牧草品种,因此需要更好的饲料,同时提高可持续性。尽管在过去几十年里,传统的热带牧草育种已成功培育出适应性良好且高产的品种,但鉴于全球粮食需求不断增长,这些项目的遗传增益一直较低。为确保其未来对畜牧业生产的影响,育种项目应利用基因分型、表型分型和环境分型策略来提高遗传增益。基因组选择(GS)和全基因组关联研究在这一过程中发挥着主要作用,其优势在于能提高选择准确性、缩短周期时间并增加可评估个体数量,从而增加遗传增益。该策略为传统育种方法面临的瓶颈提供了解决方案,包括育种周期长以及难以评估复杂性状等问题。在热带牧草中实施基因组选择的初步结果很有前景,相比单纯的表型选择有显著改进。然而,基因组选择在热带牧草育种项目中的实际影响仍不明确。开发规模合适的训练群体对于基于估计育种值评估和验证选择标记至关重要。需要不同热带牧草品种的大量单核苷酸多态性标记面板,以降低成本实现多种应用目标。在此背景下,本综述重点介绍了在热带牧草中实施基因组选择的当前挑战、成果、基因组资源的可用性和开发以及统计方法。此外,还讨论了近期实验的预测准确性以及利用基因库多样性的潜力。尽管热带牧草的基因组选择仍处于起步阶段,但基因组工具和统计模型的进展将在可预见的未来加速其实施。所有热带牧草育种项目都应为此类变化做好准备。