State Key Laboratory of Protein and Plant Gene Research, Center for Bioinformatics, School of Life Sciences, Peking University, Beijing, China.
Wiley Interdiscip Rev RNA. 2022 Jan;13(1):e1666. doi: 10.1002/wrna.1666. Epub 2021 May 16.
Adenosine-to-inosine (A-to-I) RNA editing is an evolutionarily conserved mechanism that converts adenosines to inosines in metazoans' transcriptomes. However, the landscapes of editomes have considerably changed during evolution. Here, we review some of our current knowledge of A-to-I editing in the metazoan transcriptomes, focusing on the possible evolutionary driving forces underlying the editing events. First, we review the evolution of ADAR gene family in animals. Then, we summarize the recent advances in characterizing the editomes of various metazoan species. Next, we highlight several factors contributing to the interspecies differences in editomes, including variations in copy number and expression patterns of ADAR genes, the differences in genomic architectures and contents, and the differences in the efficacy of natural selection. After that, we review the possible diversifying and restorative effects of the editing (recoding) events that change the protein sequences. Finally, we discuss the possible convergent evolution of RNA editing in distantly related clades. This article is categorized under: RNA Evolution and Genomics > RNA and Ribonucleoprotein Evolution RNA Processing > RNA Editing and Modification.
腺嘌呤到次黄嘌呤(A-to-I)RNA 编辑是一种进化上保守的机制,它将真核生物转录组中的腺嘌呤转化为次黄嘌呤。然而,编辑组在进化过程中发生了相当大的变化。在这里,我们回顾了真核生物转录组中 A-to-I 编辑的一些现有知识,重点介绍了编辑事件背后可能的进化驱动力。首先,我们回顾了动物 ADAR 基因家族的进化。然后,我们总结了近年来在描述各种真核生物物种的编辑组方面的进展。接下来,我们强调了导致编辑组在物种间存在差异的几个因素,包括 ADAR 基因的拷贝数和表达模式的变化、基因组结构和内容的差异,以及自然选择效力的差异。之后,我们回顾了改变蛋白质序列的编辑(重编码)事件的多样化和恢复效应。最后,我们讨论了在远缘进化枝中 RNA 编辑的可能趋同进化。本文属于以下分类:RNA 进化和基因组学 > RNA 和核糖核蛋白进化 RNA 加工 > RNA 编辑和修饰。