Pritzker School of Molecular Engineering, University of Chicago, Chicago, Illinois 60637, United States.
Department of Chemistry, University of Utah, Salt Lake City, Utah 84112, United States.
J Phys Chem B. 2021 Jun 3;125(21):5572-5586. doi: 10.1021/acs.jpcb.1c01795. Epub 2021 May 20.
Lipid droplets (LDs) are intracellular storage organelles composed of neutral lipids, such as triacylglycerol (TG), surrounded by a phospholipid (PL) monolayer decorated with specific proteins. Herein, we investigate the mechanism of protein association during LD and bilayer membrane expansion. We find that the neutral lipids play a dynamic role in LD expansion by further intercalating with the PL monolayer to create more surface-oriented TG molecules (SURF-TG). This interplay both reduces high surface tension incurred during LD budding or growth and also creates expansion-specific surface features for protein recognition. We then show that the autoinhibitory (AI) helix of CTP:phosphocholine cytidylyltransferase, a protein known to target expanding monolayers and bilayers, preferentially associates with large packing defects in a sequence-specific manner. Despite the presence of three phenylalanines, the initial binding with bilayers is predominantly mediated by the sole tryptophan due to its preference for membrane interfaces. Subsequent association is dependent on the availability of large, neighboring defects that can accommodate the phenylalanines, which are more probable in the stressed systems. Tryptophan, once fully associated, preferentially interacts with the glycerol moiety of SURF-TG in LDs. The calculation of AI binding free energy, hydrogen bonding and depth analysis, and in silico mutation experiments support the findings. Hence, SURF-TG can both reduce surface tension and mediate protein association, facilitating class II protein recruitment during LD expansion.
脂滴(LDs)是由中性脂质组成的细胞内储存细胞器,例如三酰基甘油(TG),由周围的磷脂(PL)单层包围,单层上装饰有特定的蛋白质。在此,我们研究了 LD 和双层膜扩展过程中蛋白质结合的机制。我们发现,中性脂质通过进一步插入 PL 单层来形成更多面向表面的 TG 分子(SURF-TG),从而在 LD 扩展中发挥动态作用。这种相互作用不仅降低了在 LD 出芽或生长过程中产生的高表面张力,而且还为蛋白质识别创造了扩展特异性的表面特征。然后,我们表明,已知靶向扩展单层和双层膜的 CTP:磷酸胆碱胞苷转移酶的自动抑制(AI)螺旋,以序列特异性的方式优先与大的包装缺陷结合。尽管存在三个苯丙氨酸,但由于其对膜界面的偏好,初始与双层膜的结合主要由单一色氨酸介导。随后的关联取决于能够容纳苯丙氨酸的大相邻缺陷的可用性,在应激系统中这些缺陷更有可能存在。色氨酸一旦完全结合,就会优先与 LD 中的 SURF-TG 的甘油部分相互作用。AI 结合自由能的计算、氢键和深度分析以及计算机突变实验支持了这一发现。因此,SURF-TG 既能降低表面张力,又能介导蛋白质结合,促进 II 类蛋白在 LD 扩展过程中的募集。