Pritzker School of Molecular Engineering, University of Chicago, Chicago, Illinois 60637, United States.
Department of Chemistry, University of Utah, Salt Lake City, Utah 84112, United States.
J Phys Chem B. 2022 Mar 24;126(11):2145-2154. doi: 10.1021/acs.jpcb.2c00292. Epub 2022 Mar 9.
Lipid droplets (LDs) are intracellular organelles whose primary function is energy storage. Known to emerge from the endoplasmic reticulum (ER) bilayer, LDs have a unique structure with a core consisting of neutral lipids, triacylglycerol (TG) or sterol esters (SE), surrounded by a phospholipid (PL) monolayer and decorated by proteins that come and go throughout their complex lifecycle. In this Feature Article, we review recent developments in computational studies of LDs, a rapidly growing area of research. We highlight how molecular dynamics (MD) simulations have provided valuable molecular-level insight into LD targeting and LD biogenesis. Additionally, we review the physical properties of TG from different force fields compared with experimental data. Possible future directions and challenges are discussed.
脂滴(LDs)是细胞内的细胞器,其主要功能是储存能量。已知 LD 从内质网(ER)双层膜中出现,具有独特的结构,核心由中性脂质、三酰基甘油(TG)或固醇酯(SE)组成,周围是一层磷脂(PL)单层,并由在其复杂生命周期中来来去去的蛋白质装饰。在这篇专题文章中,我们回顾了 LD 计算研究的最新进展,这是一个快速发展的研究领域。我们强调了分子动力学(MD)模拟如何为 LD 靶向和 LD 生物发生提供有价值的分子水平见解。此外,我们还比较了不同力场中 TG 的物理性质与实验数据。讨论了可能的未来方向和挑战。