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哈茨木霉THIF08菌株的真菌羰基硫化物水解酶及其与进化枝D β-碳酸酐酶的关系

Fungal Carbonyl Sulfide Hydrolase of Trichoderma harzianum Strain THIF08 and Its Relationship with Clade D β-Carbonic Anhydrases.

作者信息

Masaki Yoshihito, Iizuka Ryuka, Kato Hiromi, Kojima Yuka, Ogawa Takahiro, Yoshida Makoto, Matsushita Yasuhiko, Katayama Yoko

机构信息

Graduate School of Agriculture, Tokyo University of Agriculture and Technology.

Graduate School of Life Sciences, Tohoku University.

出版信息

Microbes Environ. 2021;36(2). doi: 10.1264/jsme2.ME20058.

Abstract

Carbonyl sulfide (COS) is the most abundant and long-lived sulfur-containing gas in the atmosphere. Soil is the main sink of COS in the atmosphere and uptake is dominated by soil microorganisms; however, biochemical research has not yet been conducted on fungal COS degradation. COS hydrolase (COSase) was purified from Trichoderma harzianum strain THIF08, which degrades COS at concentrations higher than 10,000 parts per million by volume from atmospheric concentrations, and its gene cos (492 bp) was cloned. The recombinant protein purified from Escherichia coli expressing the cos gene converted COS to HS. The deduced amino acid sequence of COSase (163 amino acids) was assigned to clade D in the phylogenetic tree of the β-carbonic anhydrase (β-CA) family, to which prokaryotic COSase and its structurally related enzymes belong. However, the COSase of strain THIF08 differed from the previously known prokaryotic COSase and its related enzymes due to its low reactivity to CO and inability to hydrolyze CS. Sequence comparisons of the active site amino acids of clade D β-CA family enzymes suggested that various Ascomycota, particularly Sordariomycetes and Eurotiomycetes, possess similar enzymes to the COSase of strain THIF08 with >80% identity. These fungal COSase were phylogenetically distant to prokaryotic clade D β-CA family enzymes. These results suggest that various ascomycetes containing COSase contribute to the uptake of COS by soil.

摘要

羰基硫(COS)是大气中含量最丰富且寿命最长的含硫气体。土壤是大气中COS的主要汇,其吸收主要由土壤微生物主导;然而,尚未对真菌降解COS进行生化研究。从哈茨木霉菌株THIF08中纯化出了COS水解酶(COSase),该菌株能在高于大气浓度百万分之10000体积分数的情况下降解COS,并克隆了其基因cos(492bp)。从表达cos基因的大肠杆菌中纯化出的重组蛋白将COS转化为HS。COSase推导的氨基酸序列(163个氨基酸)在β-碳酸酐酶(β-CA)家族的系统发育树中被归为D类,原核COSase及其结构相关酶属于该家族。然而,菌株THIF08的COSase与先前已知的原核COSase及其相关酶不同,因为它对CO的反应性低且不能水解CS。D类β-CA家族酶活性位点氨基酸的序列比较表明,各种子囊菌,特别是粪壳菌纲和散囊菌纲,拥有与菌株THIF08的COSase相似的酶,同一性>80%。这些真菌COSase在系统发育上与原核D类β-CA家族酶距离较远。这些结果表明,含有COSase的各种子囊菌有助于土壤对COS的吸收。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9759/8209446/a75aacfff86c/36_20058-g001.jpg

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