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破伤风梭菌的见解:从基因组到生物反应器

Insights into Clostridium tetani: From genome to bioreactors.

作者信息

Garrigues Lucile, Do Thuy Duong, Bideaux Carine, Guillouet Stéphane E, Meynial-Salles Isabelle

机构信息

TBI, Université de Toulouse, CNRS, INRAE, INSA, Toulouse, France.

TBI, Université de Toulouse, CNRS, INRAE, INSA, Toulouse, France.

出版信息

Biotechnol Adv. 2022 Jan-Feb;54:107781. doi: 10.1016/j.biotechadv.2021.107781. Epub 2021 May 23.

Abstract

Tetanus vaccination is of major importance for public health in most countries in the world. The World Health Organization indicated that 15,000 tetanus cases were reported in 2018 (Organization, World Health, 2019). Currently, vaccine manufacturers use tetanus toxin produced by Clostridium tetani fermentation in complex media. The complex components, commonly derived from animal sources, introduce potential variability in cultures. To achieve replicable fermentation and to avoid toxic or allergic reactions from animal-source compounds, several studies have tried to switch from complex to chemically defined media without affecting toxin titers. The present review introduces the current knowledge on i) C. tetani strain diversity, whole-genome sequences and metabolic networks; ii) toxin regulation and synthesis; and iii) culture media, cultivation processes and growth requirements. We critically reviewed the reported data on metabolism in C. tetani and completed comparative genomic and proteomic analyses with other Clostridia species. We integrated genomic data based on whole-genome sequence annotation, supplemented with cofactor specificities determined by protein sequence identity, in a new map of C. tetani central metabolism. This is the first data review that integrates insights from omics experiments on C. tetani. The overview of C. tetani physiology described here could provide support for the design of new chemically defined media devoid of complex sources for toxin production.

摘要

破伤风疫苗接种对世界上大多数国家的公共卫生至关重要。世界卫生组织指出,2018年报告了15000例破伤风病例(世界卫生组织,2019年)。目前,疫苗制造商使用破伤风梭菌在复杂培养基中发酵产生的破伤风毒素。这些复杂成分通常来源于动物,会在培养过程中引入潜在的变异性。为了实现可重复的发酵,并避免动物源化合物产生的毒性或过敏反应,多项研究试图从复杂培养基转向化学成分明确的培养基,同时不影响毒素效价。本综述介绍了关于以下方面的现有知识:i)破伤风梭菌菌株多样性、全基因组序列和代谢网络;ii)毒素调节与合成;iii)培养基、培养过程和生长需求。我们批判性地回顾了已报道的破伤风梭菌代谢数据,并与其他梭菌属物种进行了比较基因组和蛋白质组分析。我们基于全基因组序列注释整合基因组数据,并辅以通过蛋白质序列同一性确定的辅因子特异性,构建了一张新的破伤风梭菌中心代谢图谱。这是首次整合破伤风梭菌组学实验见解的数据综述。本文所述的破伤风梭菌生理学概述可为设计不含复杂来源的新型化学成分明确的毒素生产培养基提供支持。

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