Pillai Anirudh, Gungi Akhila, Reddy Puli Chandramouli, Galande Sanjeev
Centre of Excellence in Epigenetics, Department of Biology, Indian Institute of Science Education and Research, Pune, India.
Front Cell Dev Biol. 2021 May 10;9:663208. doi: 10.3389/fcell.2021.663208. eCollection 2021.
Transitions in gene regulatory processes responsible for the emergence of specialized cell types and spatiotemporal regulation of developmental signaling prior to the divergence of Cnidaria and Bilateria are poorly understood. As a sister group of Bilateria, the phylum Cnidaria can provide significant insights into these processes. Among the cnidarians, hydrae have been studied for >250 years to comprehend the mechanisms underlying their unique immortality and robust regenerative capacity. Studies on spp. and other pre-bilaterians alike have advanced our understanding of the evolutionary underpinnings governing eumetazoan tissue development, homeostasis, and regeneration. In addition to its regenerative potential, exhibits continuously active axial patterning due to its peculiar tissue dynamics. These distinctive physiological processes necessitate large scale gene expression changes that are governed by the multitude of epigenetic mechanisms operating in cells. This review highlights the contemporary knowledge of epigenetic regulation in with contemporary studies from other members of Cnidaria, as well as the interplay between regulatory mechanisms wherever demonstrated. The studies covered in the scope of this review reveal both ancestral and divergent roles played by conserved epigenetic mechanisms with emphasis on transcriptional regulation. Additionally, single-cell transcriptomics data was mined to predict the physiological relevance of putative gene regulatory components, which is in agreement with published findings and yielded insights into the possible functions of the gene regulatory mechanisms that are yet to be deciphered in , such as DNA methylation. Finally, we delineate potentially rewarding epigenetics research avenues that can further leverage the unique biology of .
在刺胞动物门和两侧对称动物分化之前,负责特化细胞类型出现和发育信号时空调节的基因调控过程尚不清楚。作为两侧对称动物的姐妹群,刺胞动物门可以为这些过程提供重要见解。在刺胞动物中,水螅已经被研究了250多年,以了解其独特的永生和强大再生能力背后的机制。对 物种和其他前两侧对称动物的研究同样推进了我们对后生动物组织发育、稳态和再生的进化基础的理解。除了其再生潜力外,由于其特殊的组织动态, 还表现出持续活跃的轴向模式形成。这些独特的生理过程需要大规模的基因表达变化,而这些变化由细胞中多种表观遗传机制控制。本综述强调了 中表观遗传调控的当代知识,以及来自刺胞动物门其他成员的当代研究,以及所证明的调控机制之间的相互作用。本综述范围内涵盖的研究揭示了保守表观遗传机制所起的祖先和不同作用,重点是转录调控。此外,挖掘单细胞转录组学数据以预测假定基因调控成分的生理相关性,这与已发表的研究结果一致,并深入了解了 在 中尚未破译的基因调控机制的可能功能,如DNA甲基化。最后,我们描绘了潜在有益的表观遗传学研究途径,这些途径可以进一步利用 的独特生物学特性。