从患有中耳炎的犬耳道分离出的厚皮马拉色菌的全基因组测序与组装
Whole-Genome Sequencing and Assembly of Malassezia pachydermatis Isolated from the Ear Canal of a Dog with Otitis.
作者信息
D'Andreano S, Viñes J, Francino O
机构信息
SVGM, Molecular Genetics Veterinary Service, Universitat Autònoma de Barcelona, Bellaterra, Barcelona, Spain.
Vetgenomics, Edifici EUREKA, PRUAB, Bellaterra, Barcelona, Spain.
出版信息
Microbiol Resour Announc. 2021 May 27;10(21):e0020521. doi: 10.1128/MRA.00205-21.
Abstract
We have assembled the genome sequence of Malassezia pachydermatis isolated from a canine otitis sample with Nanopore-only long reads. With 99× coverage and 8.23 Mbp, the genome sequence was assembled in 10 contigs, with 6 of them corresponding to chromosomes, improving the scaffolding of previous genome assemblies for the species.
摘要
我们利用仅基于纳米孔的长读长技术，组装了从一份犬中耳炎样本中分离出的厚皮马拉色菌的基因组序列。该基因组序列的覆盖度为99倍，大小为823万碱基对，组装成了10个重叠群，其中6个对应于染色体，改进了该物种先前基因组组装的支架构建。
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