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评估与获得抗革兰氏阴性菌活性相关的规则。

Assessment of the rules related to gaining activity against Gram-negative bacteria.

作者信息

Ropponen Henni-Karoliina, Diamanti Eleonora, Siemens Alexandra, Illarionov Boris, Haupenthal Jörg, Fischer Markus, Rottmann Matthias, Witschel Matthias, Hirsch Anna K H

机构信息

Helmholtz Institute for Pharmaceutical Research Saarland (HIPS) - Helmholtz Centre for Infection Research (HZI) Campus Building E8.1 66123 Saarbrücken Germany

Department of Pharmacy, Saarland University Campus Building E8.1 66123 Saarbrücken Germany.

出版信息

RSC Med Chem. 2021 Mar 3;12(4):593-601. doi: 10.1039/d0md00409j. eCollection 2021 Apr 28.

DOI:10.1039/d0md00409j
PMID:34046630
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8128065/
Abstract

In the search for new antibacterial compounds, we repositioned an antimalarial compound class by derivatising it based on the so-called "eNTRy" rules for enhanced accumulation into Gram-negative bacteria. We designed, synthesised and evaluated a small library of amino acid modified compounds together with the respective Boc-protected analogues, leading to no substantial improvement in antibacterial activity against wild-type K12, whereas more distinct activity differences were observed in mutant strains Δ, D22, Δ and BL21(DE3)omp8. A comparison of the activity results of the mutants with respect to the known rules related to enhanced activity against Gram-negative bacteria revealed that applicability of the rules is not always ensured. Out of the four amino acids used in this study, glycine derivatives showed highest antibacterial activity, although still suffering from efflux issues.

摘要

在寻找新型抗菌化合物的过程中,我们通过基于所谓的“eNTRy”规则对一种抗疟化合物类别进行衍生化,以使其增强在革兰氏阴性菌中的积累,从而对其进行了重新定位。我们设计、合成并评估了一个由氨基酸修饰化合物及其相应的Boc保护类似物组成的小型文库,结果显示对野生型K12的抗菌活性没有实质性提高,而在突变菌株Δ、D22、Δ和BL21(DE3)omp8中观察到了更明显的活性差异。将突变体的活性结果与已知的与增强对革兰氏阴性菌活性相关的规则进行比较后发现,这些规则的适用性并非总能得到保证。在本研究中使用的四种氨基酸中,甘氨酸衍生物表现出最高的抗菌活性,尽管仍存在外排问题。

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Discovery of Pyrido[2,3-]indole Derivatives with Gram-Negative Activity Targeting Both DNA Gyrase and Topoisomerase IV.发现具有革兰氏阴性活性的吡啶并[2,3-]吲哚衍生物,靶向 DNA 拓扑异构酶 II 和拓扑异构酶 IV。
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Antibacterial medicinal chemistry - what can we design for?抗菌药物化学——我们能设计出什么?
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Gram-Negative Antibiotic Active Through Inhibition of an Essential Riboswitch.通过抑制必需的核糖开关发挥作用的革兰氏阴性抗生素。
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The Uptake and Release of Amino Acids by at Mid-Exponential and Stationary Phases and Their Corresponding Responses to Changes in Temperature, pH and Osmolality.处于指数中期和稳定期的[具体对象]对氨基酸的摄取与释放及其对温度、pH值和渗透压变化的相应反应
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