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基于 Creoptix WAVE 系统的高通量动力学筛选的稳健分析方法——waveRAPID

waveRAPID-A Robust Assay for High-Throughput Kinetic Screens with the Creoptix WAVEsystem.

机构信息

Creoptix AG, Waedenswil, Switzerland.

出版信息

SLAS Discov. 2021 Sep;26(8):995-1003. doi: 10.1177/24725552211013827. Epub 2021 May 28.

Abstract

Surface-based biophysical methods for measuring binding kinetics of molecular interactions, such as surface plasmon resonance (SPR) or grating-coupled interferometry (GCI), are now well established and widely used in drug discovery. Increasing throughput is an often-cited need in the drug discovery process and this has been achieved with new instrument generations where multiple interactions are measured in parallel, shortening the total measurement times and enabling new application areas within the field. Here, we present the development of a novel technology called waveRAPID for a further-up to 10-fold-increase in throughput, consisting of an injection method using a single sample. Instead of sequentially injecting increasing analyte concentrations for constant durations, the analyte is injected at a single concentration in short pulses of increasing durations. A major advantage of the new method is its ability to determine kinetics from a single well of a microtiter plate, making it uniquely suitable for kinetic screening. We present the fundamentals of this approach using a small-molecule model system for experimental validation and comparing kinetic parameters to traditional methods. By varying experimental conditions, we furthermore assess the robustness of this new technique. Finally, we discuss its potential for improving hit quality and shortening cycle times in the areas of fragment screening, low-molecular-weight compound screening, and hit-to-lead optimization.

摘要

基于表面的生物物理方法用于测量分子相互作用的结合动力学,如表面等离子体共振(SPR)或光栅耦合干涉测量法(GCI),现已得到广泛应用。在药物发现过程中,提高通量是一个经常被提到的需求,这可以通过新一代仪器来实现,这些仪器可以同时测量多个相互作用,缩短总测量时间,并在该领域开辟新的应用领域。在这里,我们介绍了一种名为 waveRAPID 的新技术的开发,该技术可将通量提高多达 10 倍,它由一种使用单个样本的注入方法组成。与传统方法中连续注入不同浓度的分析物并保持恒定时间不同,该方法以短脉冲形式注入单个浓度的分析物,脉冲持续时间逐渐增加。该新方法的一个主要优势是能够从微孔板的单个孔中确定动力学,使其非常适合用于动力学筛选。我们使用小分子模型系统介绍了该方法的基本原理,以进行实验验证,并将动力学参数与传统方法进行比较。通过改变实验条件,我们进一步评估了这项新技术的稳健性。最后,我们讨论了它在提高片段筛选、低分子量化合物筛选和命中到先导优化领域的命中质量和缩短周期时间方面的潜力。

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