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基于受影响胚胎的 SNP 单体型分析与 NGS 在马凡综合征植入前遗传学检测中的应用。

Affected-embryo-based SNP haplotyping with NGS for the preimplantation genetic testing of Marfan syndrome.

机构信息

Center of Reproductive Medicine, Guangzhou Women and Children's Medical Center, Guangzhou Medical University, Guangzhou, China.

Center of Prenatal Diagnosis, Guangzhou Women and Children's Medical Center, Guangzhou Medical University, Guangzhou, China.

出版信息

Syst Biol Reprod Med. 2021 Aug;67(4):298-306. doi: 10.1080/19396368.2021.1926574. Epub 2021 May 30.

Abstract

Marfan syndrome (MFS), an autosomal dominant heritable disease of the connective tissue, is characterized by broad clinical manifestations in the musculoskeletal, cardiovascular, pulmonary, and ocular systems. In this study, a male patient with MFS caused by a heterozygous mutation NM_000138.5():c.6037 + 2 T > C in the fibrillin 1 gene () underwent preimplantation genetic testing (PGT) by using affected-embryo-based single nucleotide polymorphism (SNP) haplotyping. Multiple displacement amplification was used for whole genome amplification of biopsied trophectoderm cells after controlled ovarian stimulation. Sanger sequencing and next-generation sequencing (NGS) were used to detect the state of mutation. A total of 14 blastocysts formed after intracytoplasmic sperm injection were biopsied. After NGS, 60 informative polymorphic SNP markers located upstream and downstream of the FBN1 gene and its pathogenic mutation site were linked to individual alleles. Sanger sequencing further confirmed that 8 blastocysts carried the mutation NM_000138.5():c.6037 + 2 T > C, while 6 did not. Four of the non-carriers were euploid verified by copy number variation results. A female infant without MFS was born at 37 weeks gestation after a subsequent frozen embryo transfer. In conclusion, the successful case indicates that SNP haplotyping using sibling embryos as a reference is applicable to PGT in monogenetic diseases. MFS: Marfan syndrome; PGT: preimplantation genetic testing; FBN1: fibrillin 1 gene; NGS: next-generation sequencing; SNP: single nucleotide polymorphism.

摘要

马凡综合征(MFS)是一种常染色体显性遗传性结缔组织疾病,其特征是在肌肉骨骼、心血管、肺和眼部系统中有广泛的临床表现。在本研究中,一名男性 MFS 患者携带纤维连接蛋白 1 基因()中的杂合突变 NM_000138.5():c.6037 + 2T > C,该基因导致疾病发生。采用基于受影响胚胎的单核苷酸多态性(SNP)单体型分析方法对其进行了胚胎植入前遗传学检测(PGT)。在控制性卵巢刺激后,使用多重置换扩增法对活检滋养外胚层细胞进行全基因组扩增。采用 Sanger 测序和下一代测序(NGS)检测突变状态。经卵胞浆内单精子注射后共形成 14 个囊胚,对其进行活检。NGS 后,与 FBN1 基因及其致病突变位点上下游的 60 个信息性多态 SNP 标记物相联系的个体等位基因被链接。Sanger 测序进一步证实 8 个囊胚携带突变 NM_000138.5():c.6037 + 2T > C,而 6 个囊胚未携带该突变。拷贝数变异结果证实其中 4 个非携带者为整倍体。随后进行了冷冻胚胎移植,一名 37 周妊娠且无 MFS 的女性婴儿出生。总之,该成功案例表明,使用同胞胚胎作为参考的 SNP 单体型分析可适用于单基因疾病的 PGT。MFS:马凡综合征;PGT:胚胎植入前遗传学检测;FBN1:纤维连接蛋白 1 基因;NGS:下一代测序;SNP:单核苷酸多态性。

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