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骨肉瘤的数据驱动数学模型

Data-Driven Mathematical Model of Osteosarcoma.

作者信息

Le Trang, Su Sumeyye, Kirshtein Arkadz, Shahriyari Leili

机构信息

Department of Mathematics and Statistics, University of Massachusetts Amherst, Amherst, MA 01003, USA.

Department of Mathematics, Tufts University, Medford, MA 02155, USA.

出版信息

Cancers (Basel). 2021 May 14;13(10):2367. doi: 10.3390/cancers13102367.

Abstract

As the immune system has a significant role in tumor progression, in this paper, we develop a data-driven mathematical model to study the interactions between immune cells and the osteosarcoma microenvironment. Osteosarcoma tumors are divided into three clusters based on their relative abundance of immune cells as estimated from their gene expression profiles. We then analyze the tumor progression and effects of the immune system on cancer growth in each cluster. Cluster 3, which had approximately the same number of naive and M2 macrophages, had the slowest tumor growth, and cluster 2, with the highest population of naive macrophages, had the highest cancer population at the steady states. We also found that the fastest growth of cancer occurred when the anti-tumor immune cells and cytokines, including dendritic cells, helper T cells, cytotoxic cells, and IFN-γ, switched from increasing to decreasing, while the dynamics of regulatory T cells switched from decreasing to increasing. Importantly, the most impactful immune parameters on the number of cancer and total cells were the activation and decay rates of the macrophages and regulatory T cells for all clusters. This work presents the first osteosarcoma progression model, which can be later extended to investigate the effectiveness of various osteosarcoma treatments.

摘要

由于免疫系统在肿瘤进展中起着重要作用,在本文中,我们开发了一个数据驱动的数学模型来研究免疫细胞与骨肉瘤微环境之间的相互作用。根据骨肉瘤肿瘤基因表达谱估计的免疫细胞相对丰度,将其分为三个簇。然后,我们分析了每个簇中的肿瘤进展以及免疫系统对癌症生长的影响。簇3中幼稚巨噬细胞和M2巨噬细胞数量大致相同,其肿瘤生长最慢;而簇2中幼稚巨噬细胞数量最多,在稳态时癌症细胞数量最高。我们还发现,当包括树突状细胞、辅助性T细胞、细胞毒性细胞和干扰素-γ在内的抗肿瘤免疫细胞和细胞因子从增加转为减少,而调节性T细胞的动态从减少转为增加时,癌症生长最快。重要的是,对于所有簇,对癌症细胞数量和总细胞数量影响最大的免疫参数是巨噬细胞和调节性T细胞的激活率和衰减率。这项工作提出了首个骨肉瘤进展模型,该模型随后可扩展用于研究各种骨肉瘤治疗方法的有效性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/077a/8156666/bf0f674e11ce/cancers-13-02367-g0A1.jpg

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