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弥漫性大B细胞淋巴瘤中恶病质诱导因子的综合特征揭示了一种分子亚型和一种与预后相关的特征。

Comprehensive Characterization of Cachexia-Inducing Factors in Diffuse Large B-Cell Lymphoma Reveals a Molecular Subtype and a Prognosis-Related Signature.

作者信息

Kuang Zhixing, Li Xun, Liu Rongqiang, Chen Shaoxing, Tu Jiannan

机构信息

Department of Radiation Oncology, Nanping First Hospital Affiliated to Fujian Medical University, Nanping, China.

Department of Oncology, Haikou Hospital Affiliated to Xiangya Medical College, Central South University, Haikou, China.

出版信息

Front Cell Dev Biol. 2021 May 17;9:648856. doi: 10.3389/fcell.2021.648856. eCollection 2021.

Abstract

BACKGROUND

Cachexia is defined as an involuntary decrease in body weight, which can increase the risk of death in cancer patients and reduce the quality of life. Cachexia-inducing factors (CIFs) have been reported in colorectal cancer and pancreatic adenocarcinoma, but their value in diffuse large B-cell lymphoma (DLBCL) requires further genetic research.

METHODS

We used gene expression data from Gene Expression Omnibus to evaluate the expression landscape of 25 known CIFs in DLBCL patients and compared them with normal lymphoma tissues from two cohorts [GSE56315 ( = 88) and GSE12195 ( = 136)]. The mutational status of CIFs were also evaluated in The Cancer Genome Atlas database. Based on the expression profiles of 25 CIFs, a single exploratory dataset which was merged by the datasets of GSE10846 ( = 420) and GSE31312 ( = 498) were divided into two molecular subtypes by using the method of consensus clustering. Immune microenvironment between different subtypes were assessed single-sample gene set enrichment analysis and the CIBERSORT algorithm. The treatment response of commonly used chemotherapeutic drugs was predicted and gene set variation analysis was utilized to reveal the divergence in activated pathways for distinct subtypes. A risk signature was derived by univariate Cox regression and LASSO regression in the merged dataset ( = 882), and two independent cohorts [GSE87371 ( = 221) and GSE32918 ( = 244)] were used for validation, respectively.

RESULTS

Clustering analysis with CIFs further divided the cases into two molecular subtypes (cluster A and cluster B) associated with distinct prognosis, immunological landscape, chemosensitivity, and biological process. A risk-prognostic signature based on CCL2, CSF2, IL15, IL17A, IL4, TGFA, and TNFSF10 for DLBCL was developed, and significant differences in overall survival analysis were found between the low- and high-risk groups in the training dataset and another two independent validation datasets. Multivariate regression showed that the risk signature was an independently prognostic factor in contrast to other clinical characteristics.

CONCLUSION

This study demonstrated that CIFs further contribute to the observed heterogeneity of DLBCL, and molecular classification and a risk signature based on CIFs are both promising tools for prognostic stratification, which may provide important clues for precision medicine and tumor-targeted therapy.

摘要

背景

恶病质被定义为体重非自愿性下降,这会增加癌症患者的死亡风险并降低生活质量。在结直肠癌和胰腺腺癌中已报道了恶病质诱导因子(CIFs),但其在弥漫性大B细胞淋巴瘤(DLBCL)中的价值需要进一步的遗传学研究。

方法

我们使用来自基因表达综合数据库(Gene Expression Omnibus)的基因表达数据来评估DLBCL患者中25种已知CIFs的表达情况,并将其与两个队列[GSE56315(n = 88)和GSE12195(n = 136)]的正常淋巴瘤组织进行比较。还在癌症基因组图谱数据库中评估了CIFs的突变状态。基于25种CIFs的表达谱,使用一致性聚类方法将由GSE10846(n = 420)和GSE31312(n = 498)数据集合并而成的单个探索性数据集分为两种分子亚型。通过单样本基因集富集分析和CIBERSORT算法评估不同亚型之间的免疫微环境。预测常用化疗药物的治疗反应,并利用基因集变异分析揭示不同亚型激活途径的差异。通过单变量Cox回归和LASSO回归在合并数据集(n = 882)中得出风险特征,并分别使用两个独立队列[GSE87371(n = 221)和GSE32918(n = 244)]进行验证。

结果

用CIFs进行聚类分析进一步将病例分为两种与不同预后、免疫格局、化疗敏感性和生物学过程相关的分子亚型(A簇和B簇)。建立了基于CCL2、CSF2、IL15、IL17A、IL4、TGFA和TNFSF10的DLBCL风险预后特征,在训练数据集以及另外两个独立验证数据集中,低风险组和高风险组的总生存分析存在显著差异。多变量回归显示,与其他临床特征相比,风险特征是一个独立的预后因素。

结论

本研究表明,CIFs进一步导致了观察到的DLBCL异质性,基于CIFs的分子分类和风险特征都是用于预后分层的有前景的工具,这可能为精准医学和肿瘤靶向治疗提供重要线索。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6b14/8166255/3a0bbfc6d1a0/fcell-09-648856-g001.jpg

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