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[一个不断发展和蓬勃兴起的代谢工程]

[An evolving and flourishing metabolic engineering].

作者信息

Liu Zhifeng, Wang Yong

机构信息

CAS Center for Excellence in Molecular Plant Sciences, Key Laboratory of Synthetic Biology, Chinese Academy of Sciences, Shanghai 200032, China.

University of Chinese Academy of Sciences, Beijing 100039, China.

出版信息

Sheng Wu Gong Cheng Xue Bao. 2021 May 25;37(5):1494-1509. doi: 10.13345/j.cjb.200729.

Abstract

In 1990s, Bailey and Stephanopoulos put forward the concept of classic metabolic engineering, aiming to use DNA recombination technology to rewire metabolic network to achieve improved cell performance and increased target products. In the last 30 years since the birth of metabolic engineering, life science have flourished, and new disciplines such as genomics, systems biology and synthetic biology have emerged, injecting new connotations and vitality into the development of metabolic engineering. Classic metabolic engineering research has entered into an unprecedented stage of systems metabolic engineering. The application of synthetic biology tools and strategies, such as omics technology, genomic-scale metabolic model, parts assembly, circuits design, dynamic control, genome editing and many others, have greatly improved the design, build, and rewiring capabilities of complex metabolism. The intervention of machine learning and the combination of evolutionary engineering and metabolic engineering will further promote the development of systems metabolic engineering. This paper analyzes the development of metabolic engineering in the past 30 years and summarizes the novel theories, techniques, strategies, and applications of metabolic engineering that have emerged over the past 30 years.

摘要

20世纪90年代,贝利和斯特凡诺普洛斯提出了经典代谢工程的概念,旨在利用DNA重组技术重新构建代谢网络,以实现细胞性能的改善和目标产物产量的提高。自代谢工程诞生后的近30年里,生命科学蓬勃发展,基因组学、系统生物学和合成生物学等新学科不断涌现,为代谢工程的发展注入了新的内涵和活力。经典代谢工程研究已进入一个前所未有的系统代谢工程阶段。合成生物学工具和策略的应用,如组学技术、基因组规模代谢模型、部件组装、回路设计、动态控制、基因组编辑等,极大地提高了复杂代谢的设计、构建和重新布线能力。机器学习的介入以及进化工程与代谢工程的结合将进一步推动系统代谢工程的发展。本文分析了代谢工程在过去30年的发展历程,并总结了过去30年中出现的代谢工程新理论、技术、策略和应用。

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