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代谢物作为锥蝽暴露的预测生物标志物。

Metabolites as predictive biomarkers for exposure in triatomine bugs.

作者信息

Eberhard Fanny E, Klimpel Sven, Guarneri Alessandra A, Tobias Nicholas J

机构信息

Institute for Ecology, Evolution and Diversity, Goethe University Frankfurt, Frankfurt/Main, Germany.

LOEWE Centre for Translational Biodiversity Genomics (LOEWE TBG), Frankfurt/Main, Germany.

出版信息

Comput Struct Biotechnol J. 2021 May 21;19:3051-3057. doi: 10.1016/j.csbj.2021.05.027. eCollection 2021.

Abstract

the causative agent of Chagas disease (American trypanosomiasis), colonizes the intestinal tract of triatomines. Triatomine bugs act as vectors in the life cycle of the parasite and transmit infective parasite stages to animals and humans. Contact of the vector with alters its intestinal microbial composition, which may also affect the associated metabolic patterns of the insect. Earlier studies suggest that the complexity of the triatomine fecal metabolome may play a role in vector competence for different strains. Using high-resolution mass spectrometry and supervised machine learning, we aimed to detect differences in the intestinal metabolome of the triatomine and predict whether the insect had been exposed to or not based solely upon their metabolic profile. We were able to predict the exposure status of to with accuracies of 93.6%, 94.2% and 91.8% using logistic regression, a random forest classifier and a gradient boosting machine model, respectively. We extracted the most important features in producing the models and identified the major metabolites which assist in positive classification. This work highlights the complex interactions between triatomine vector and parasite including effects on the metabolic signature of the insect.

摘要

恰加斯病(美洲锥虫病)的病原体寄生于锥蝽的肠道。锥蝽在寄生虫的生命周期中充当媒介,将感染性寄生虫阶段传播给动物和人类。媒介与[此处原文缺失内容]接触会改变其肠道微生物组成,这也可能影响昆虫的相关代谢模式。早期研究表明,锥蝽粪便代谢组的复杂性可能在不同[此处原文缺失内容]菌株的媒介能力中发挥作用。利用高分辨率质谱和监督机器学习,我们旨在检测锥蝽肠道代谢组的差异,并仅根据其代谢谱预测昆虫是否接触过[此处原文缺失内容]。我们分别使用逻辑回归、随机森林分类器和梯度提升机模型,能够以93.6%、94.2%和91.8%的准确率预测[此处原文缺失内容]对[此处原文缺失内容]的接触状态。我们提取了生成模型中最重要的特征,并确定了有助于阳性分类的主要代谢物。这项工作突出了锥蝽媒介与寄生虫之间的复杂相互作用,包括对昆虫代谢特征的影响。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3a0b/8178018/2be2c717ca74/ga1.jpg

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