从巴西的食品、环境、人类和兽医来源分离出的80株肠炎沙门氏菌婴儿亚种菌株的基因组序列草图
Draft Genome Sequences of 80 Salmonella enterica Serovar Infantis Strains Isolated from Food, Environmental, Human, and Veterinary Sources in Brazil.
作者信息
Vilela Felipe Pinheiro, Pribul Bruno Rocha, Rodrigues Dália Dos Prazeres, Balkey Maria, Allard Marc, Falcão Juliana Pfrimer
机构信息
Faculdade de Ciências Farmacêuticas de Ribeirão Preto-USP, Departamento de Análises Clínicas, Toxicológicas e Bromatológicas, Ribeirão Preto, São Paulo, Brazil.
Fundação Oswaldo Cruz-FIOCRUZ, Rio de Janeiro, Rio de Janeiro, Brazil.
出版信息
Microbiol Resour Announc. 2021 Jun 17;10(24):e0031321. doi: 10.1128/MRA.00313-21.
Abstract
Salmonella enterica serovar Infantis is a broadly distributed serovar infecting humans and animal reservoirs globally. Here, we report 80 draft genome sequences of . Infantis strains isolated from diverse sources in Brazil. These data will improve our understanding of the specific traits of Infantis isolated in this country.
摘要
肠炎沙门氏菌婴儿亚种是一种广泛分布的血清型，在全球范围内感染人类和动物宿主。在此，我们报告了从巴西不同来源分离出的80株婴儿亚种菌株的基因组草图序列。这些数据将增进我们对在该国分离出的婴儿亚种特定特征的了解。
相似文献
1
Draft Genome Sequences of 80 Salmonella enterica Serovar Infantis Strains Isolated from Food, Environmental, Human, and Veterinary Sources in Brazil.
Microbiol Resour Announc. 2021 Jun 17;10(24):e0031321. doi: 10.1128/MRA.00313-21.
2
Phylogenetic and population genetic analysis of Salmonella enterica subsp. enterica serovar Infantis strains isolated in Japan using whole genome sequence data.
Infect Genet Evol. 2014 Oct;27:62-8. doi: 10.1016/j.meegid.2014.06.012. Epub 2014 Jul 3.
3
Prevalence of efflux pump and heavy metal tolerance encoding genes among Salmonella enterica serovar Infantis strains from diverse sources in Brazil.
PLoS One. 2022 Nov 22;17(11):e0277979. doi: 10.1371/journal.pone.0277979. eCollection 2022.
4
Draft Genome Sequences of 256 subsp. Serovar Enteritidis Strains Isolated from Humans, Food, Chickens, and Farm Environments in Brazil.
Genome Announc. 2017 Jul 13;5(28):e00399-17. doi: 10.1128/genomeA.00399-17.
5
Draft Genome Sequences of 40 Salmonella enterica Serovar Typhimurium Strains Isolated from Humans and Food in Brazil.
Genome Announc. 2016 Sep 22;4(5):e00892-16. doi: 10.1128/genomeA.00892-16.
6
Draft Genome Sequences of 20 Salmonella enterica subsp. enterica Serovar Typhimurium Strains Isolated from Swine in Santa Catarina, Brazil.
Genome Announc. 2018 Apr 19;6(16):e00232-18. doi: 10.1128/genomeA.00232-18.
7
Draft Genome Sequences of 112 Salmonella enterica Serovar Dublin Strains Isolated from Humans and Animals in Brazil.
Genome Announc. 2018 Jun 14;6(24):e00405-18. doi: 10.1128/genomeA.00405-18.
8
Genome Sequences of Three Salmonella enterica subsp. enterica Serovar Infantis Strains from Healthy Broiler Chicks in Hungary and in the United Kingdom.
Genome Announc. 2015 Feb 12;3(1):e01468-14. doi: 10.1128/genomeA.01468-14.
9
Rapid protection of gnotobiotic pigs against experimental salmonellosis following induction of polymorphonuclear leukocytes by avirulent Salmonella enterica.
Infect Immun. 2003 Apr;71(4):2182-91. doi: 10.1128/IAI.71.4.2182-2191.2003.
10
Genome Sequences of Multidrug-Resistant Salmonella enterica subsp. enterica Serovar Infantis Strains from Broiler Chicks in Hungary.
Genome Announc. 2016 Dec 15;4(6):e01400-16. doi: 10.1128/genomeA.01400-16.
引用本文的文献
1
CRISPR and CRISPR-MVLST reveal conserved spacer distribution and high similarity among Salmonella enterica serovar Infantis genomes from Brazil and other countries.
Mol Genet Genomics. 2024 May 28;299(1):61. doi: 10.1007/s00438-024-02147-0.
2
Comparative genomics reveals high genetic similarity among strains of serovar Infantis isolated from multiple sources in Brazil.
PeerJ. 2024 May 20;12:e17306. doi: 10.7717/peerj.17306. eCollection 2024.
3
Genomic analyses of drug-resistant Salmonella enterica serovar Heidelberg strains isolated from meat and related sources between 2013 and 2017 in the south region of Brazil.
Curr Genet. 2023 Jun;69(2-3):141-152. doi: 10.1007/s00294-023-01264-4. Epub 2023 Mar 15.
4
Prevalence of efflux pump and heavy metal tolerance encoding genes among Salmonella enterica serovar Infantis strains from diverse sources in Brazil.
PLoS One. 2022 Nov 22;17(11):e0277979. doi: 10.1371/journal.pone.0277979. eCollection 2022.
5
Genomic characterization of Salmonella enterica serovar Choleraesuis from Brazil reveals a swine gallbladder isolate harboring colistin resistance gene mcr-1.1.
Braz J Microbiol. 2022 Dec;53(4):1799-1806. doi: 10.1007/s42770-022-00812-3. Epub 2022 Aug 19.
本文引用的文献
1
Optimizing open data to support one health: best practices to ensure interoperability of genomic data from bacterial pathogens.
One Health Outlook. 2020;2(1):20. doi: 10.1186/s42522-020-00026-3. Epub 2020 Oct 19.
2
CTX-M-65 Extended-Spectrum β-Lactamase-Producing Salmonella enterica Serotype Infantis, United States.
Emerg Infect Dis. 2018 Dec;24(12):2284-2291. doi: 10.3201/eid2412.180500.
3
SKESA: strategic k-mer extension for scrupulous assemblies.
Genome Biol. 2018 Oct 4;19(1):153. doi: 10.1186/s13059-018-1540-z.
4
Detection of common clones of serotype Infantis from human sources in Tehran hospitals.
Gastroenterol Hepatol Bed Bench. 2018 Winter;11(1):54-59.
5
Molecular epidemiology and virulence markers of Salmonella Infantis isolated over 25 years in São Paulo State, Brazil.
Infect Genet Evol. 2013 Oct;19:145-51. doi: 10.1016/j.meegid.2013.07.004. Epub 2013 Jul 13.
6
Genotypic diversity and virulence markers of Yersinia enterocolitica biotype 1A strains isolated from clinical and non-clinical origins.
APMIS. 2014 Mar;122(3):215-22. doi: 10.1111/apm.12126. Epub 2013 Jun 14.
7
The global burden of nontyphoidal Salmonella gastroenteritis.
Clin Infect Dis. 2010 Mar 15;50(6):882-9. doi: 10.1086/650733.
8
Genetic analysis of multi-drug resistance and the clonal dissemination of beta-lactam resistance in Salmonella Infantis isolated from broilers.
Vet Microbiol. 2010 Jan 6;140(1-2):136-41. doi: 10.1016/j.vetmic.2009.07.007. Epub 2009 Jul 10.
9
The National Center for Biotechnology Information's Protein Clusters Database.
Nucleic Acids Res. 2009 Jan;37(Database issue):D216-23. doi: 10.1093/nar/gkn734. Epub 2008 Oct 21.
Zotero 插件