Cardiff University Brain Research Imaging Centre (CUBRIC), School of Psychology, Cardiff University, Cardiff, UK.
Division of Psychological Medicine and Clinical Neurosciences, School of Medicine, Cardiff University, Cardiff, UK.
Hum Brain Mapp. 2021 Sep;42(13):4261-4280. doi: 10.1002/hbm.25545. Epub 2021 Jun 25.
A critical question in network neuroscience is how nodes cluster together to form communities, to form the mesoscale organisation of the brain. Various algorithms have been proposed for identifying such communities, each identifying different communities within the same network. Here, (using test-retest data from the Human Connectome Project), the repeatability of thirty-three community detection algorithms, each paired with seven different graph construction schemes were assessed. Repeatability of community partition depended heavily on both the community detection algorithm and graph construction scheme. Hard community detection algorithms (in which each node is assigned to only one community) outperformed soft ones (in which each node can belong to more than one community). The highest repeatability was observed for the fast multi-scale community detection algorithm paired with a graph construction scheme that combines nine white matter metrics. This pair also gave the highest similarity between representative group community affiliation and individual community affiliation. Connector hubs had higher repeatability than provincial hubs. Our results provide a workflow for repeatable identification of structural brain networks communities, based on the optimal pairing of community detection algorithm and graph construction scheme.
网络神经科学中的一个关键问题是节点如何聚集在一起形成社区,从而形成大脑的中尺度组织。已经提出了各种用于识别此类社区的算法,每种算法都在同一个网络中识别不同的社区。在这里,(使用人类连接组计划的测试 - 重测数据),评估了三十三种社区检测算法中的每一种,每种算法都与七种不同的图构建方案配对。社区划分的可重复性在很大程度上取决于社区检测算法和图构建方案。硬社区检测算法(其中每个节点仅分配给一个社区)优于软社区检测算法(其中每个节点可以属于多个社区)。与结合了九种白质指标的图构建方案相结合的快速多尺度社区检测算法观察到了最高的可重复性。这对也给出了代表性群体社区隶属关系和个体社区隶属关系之间的最高相似性。连接枢纽的可重复性高于省级枢纽。我们的结果提供了一种基于社区检测算法和图构建方案最佳配对的可重复识别结构脑网络社区的工作流程。