一种半红树植物（锦葵科）的完整叶绿体基因组
Complete chloroplast genome of a semi-mangrove plant (Malvaceae).
作者信息
Hu Gang, Hu Cong, Peng Xingbing, Lu Shaonuan, Zhang Zhonghua
机构信息
College of Environmental and Life Sciences, Nanning Normal University, Nanning, China.
出版信息
Mitochondrial DNA B Resour. 2021 Jun 14;6(7):1904-1905. doi: 10.1080/23802359.2021.1935337.
is a semi-mangrove species that is widely distributed in tropical and subtropical coastal areas around the world. Here, the complete chloroplast (cp) genome sequence of was assembled and characterized. The cp genome was 161,748 bp in length, consisting of a large single copy (LSC) region of 89,190 bp and a small single copy (SSC) region of 19,616 bp, which were separated by a pair of 26,471 bp inverted repeat (IR) regions. The overall GC content was 36.88%. A total of 131 genes, including 85 protein-coding genes, 37 tRNA genes and 8 rRNA genes were identified. Phylogenetic tree reconstructed by 15 complete cp genomes revealed that was sister to the congeneric species .
是一种半红树植物物种，广泛分布于世界各地的热带和亚热带沿海地区。在此，组装并鉴定了其完整的叶绿体（cp）基因组序列。该cp基因组长度为161,748 bp，由一个89,190 bp的大单拷贝（LSC）区域和一个19,616 bp的小单拷贝（SSC）区域组成，这两个区域被一对26,471 bp的反向重复（IR）区域隔开。总体GC含量为36.88%。共鉴定出131个基因，包括85个蛋白质编码基因、37个tRNA基因和8个rRNA基因。由15个完整cp基因组重建的系统发育树表明，与同属物种是姐妹关系。
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