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ZmNAC080308 非编码区的自然变异有助于玉米在干旱胁迫下保持产量。

Natural variations in the non-coding region of ZmNAC080308 contributes maintaining grain yield under drought stress in maize.

机构信息

Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing, P.R. China.

International Maize and Wheat Improvement Center (CIMMYT), Texcoco, Mexico.

出版信息

BMC Plant Biol. 2021 Jun 30;21(1):305. doi: 10.1186/s12870-021-03072-9.

DOI:10.1186/s12870-021-03072-9
PMID:34193036
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8243440/
Abstract

BACKGROUND

Natural variations derived from both evolutionary selection and genetic recombination, presume to have important functions to respond to various abiotic stresses, which could be used to improve drought tolerance via genomic selection.

RESULTS

In the present study, the NAC-encoding gene of ZmNAC080308 was cloned and sequenced in 199 inbred lines in maize. Phylogenetic analysis showed that ZmNAC080308 is closely clusteredinto the same group with other well-known NAC genes responding to improve drought tolerance. In total, 86 SNPs and 47 InDels were identified in the generic region of ZmNAC080308, 19 of these variations were associated with GY (grain yield) in different environments. Nine variations in the 5'-UTR region of ZmNAC080308 are closely linked, they might regulate the gene expression and respond to improve GY under drought condition via Sp1-mediated transactivation. Two haplotypes (Hap1 and Hap2) identified in the, 5'-UTR region using the nine variations, and Hap2 containing insertion variants, exhibited 15.47 % higher GY under drought stress condition. Further, a functional marker was developed to predict the drought stress tolerance in a US maize inbred line panel. Lines carrying Hap2 exhibited > 10 % higher GY than those carrying Hap1 under drought stress condition. In Arabidopsis, overexpression ZmNAC080308 enhanced drought tolerance.

CONCLUSIONS

ZmNAC080308 is an important gene responding to drought tolerance, a functional marker is developed for improving maize drought tolerance by selecting this gene.

摘要

背景

自然变异源于进化选择和遗传重组,据推测对各种非生物胁迫具有重要功能,可用于通过基因组选择提高耐旱性。

结果

本研究在 199 个玉米自交系中克隆和测序了 NAC 编码基因 ZmNAC080308。系统发育分析表明,ZmNAC080308与其他响应提高耐旱性的知名 NAC 基因密切聚类到同一组。在 ZmNAC080308 的基因区域共鉴定出 86 个 SNP 和 47 个 InDels,其中 19 个变异与不同环境下的 GY(粒重)有关。ZmNAC080308 5'-UTR 区域的 9 个变异紧密连锁,它们可能通过 Sp1 介导的反式激活调节基因表达并响应提高干旱条件下的 GY。在 5'-UTR 区域使用这 9 个变异鉴定出两个单倍型(Hap1 和 Hap2),并且包含插入变异的 Hap2 表现出干旱胁迫条件下 15.47%更高的 GY。此外,开发了一个功能标记来预测美国玉米自交系群体中的干旱胁迫耐受性。携带 Hap2 的系在干旱胁迫条件下表现出比携带 Hap1 的系高 10%以上的 GY。在拟南芥中,过表达 ZmNAC080308 增强了耐旱性。

结论

ZmNAC080308 是一个响应耐旱性的重要基因,开发了一个功能标记用于通过选择该基因来提高玉米的耐旱性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/049c/8243440/7800fbd86516/12870_2021_3072_Fig7_HTML.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/049c/8243440/7800fbd86516/12870_2021_3072_Fig7_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/049c/8243440/b145c69ab615/12870_2021_3072_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/049c/8243440/d8e9363ff565/12870_2021_3072_Fig2_HTML.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/049c/8243440/a36172f3db9e/12870_2021_3072_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/049c/8243440/7800fbd86516/12870_2021_3072_Fig7_HTML.jpg

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