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通过筛选小分子抑制剂鉴定 SARS-CoV-2 抗病毒化合物。

Identifying SARS-CoV-2 antiviral compounds by screening for small molecule inhibitors of nsp13 helicase.

机构信息

Chromosome Replication Laboratory, The Francis Crick Institute, 1 Midland Road, London NW1 1AT, U.K.

Cell Biology of Infection Laboratory, The Francis Crick Institute, 1 Midland Road, London NW1 1AT, U.K.

出版信息

Biochem J. 2021 Jul 16;478(13):2405-2423. doi: 10.1042/BCJ20210201.

DOI:10.1042/BCJ20210201
PMID:34198322
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8286831/
Abstract

The coronavirus disease 2019 (COVID-19) pandemic, which is caused by severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), is a global public health challenge. While the efficacy of vaccines against emerging and future virus variants remains unclear, there is a need for therapeutics. Repurposing existing drugs represents a promising and potentially rapid opportunity to find novel antivirals against SARS-CoV-2. The virus encodes at least nine enzymatic activities that are potential drug targets. Here, we have expressed, purified and developed enzymatic assays for SARS-CoV-2 nsp13 helicase, a viral replication protein that is essential for the coronavirus life cycle. We screened a custom chemical library of over 5000 previously characterized pharmaceuticals for nsp13 inhibitors using a fluorescence resonance energy transfer-based high-throughput screening approach. From this, we have identified FPA-124 and several suramin-related compounds as novel inhibitors of nsp13 helicase activity in vitro. We describe the efficacy of these drugs using assays we developed to monitor SARS-CoV-2 growth in Vero E6 cells.

摘要

新型冠状病毒病(COVID-19)大流行是由严重急性呼吸系统综合征冠状病毒 2(SARS-CoV-2)引起的,是一项全球性的公共卫生挑战。虽然针对新出现和未来病毒变异体的疫苗的功效尚不清楚,但仍需要治疗方法。重新利用现有药物是寻找针对 SARS-CoV-2 的新型抗病毒药物的一种很有前途且潜在快速的机会。该病毒编码至少 9 种酶活性,这些酶活性是潜在的药物靶点。在这里,我们已经表达、纯化并开发了 SARS-CoV-2 nsp13 解旋酶的酶促测定方法,nsp13 解旋酶是一种病毒复制蛋白,对冠状病毒的生命周期至关重要。我们使用基于荧光共振能量转移的高通量筛选方法,对超过 5000 种先前经过表征的药物的定制化学文库进行了 nsp13 抑制剂的筛选。由此,我们鉴定了 FPA-124 和几种苏拉明相关化合物作为 nsp13 解旋酶体外活性的新型抑制剂。我们使用我们开发的监测 Vero E6 细胞中 SARS-CoV-2 生长的测定方法来描述这些药物的功效。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f47c/8286831/a95780777499/BCJ-478-2405-g0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f47c/8286831/436ca32b2f75/BCJ-478-2405-g0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f47c/8286831/137910d5df6e/BCJ-478-2405-g0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f47c/8286831/4a94fc652776/BCJ-478-2405-g0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f47c/8286831/cc804fd43ff0/BCJ-478-2405-g0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f47c/8286831/a95780777499/BCJ-478-2405-g0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f47c/8286831/436ca32b2f75/BCJ-478-2405-g0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f47c/8286831/137910d5df6e/BCJ-478-2405-g0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f47c/8286831/4a94fc652776/BCJ-478-2405-g0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f47c/8286831/cc804fd43ff0/BCJ-478-2405-g0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f47c/8286831/a95780777499/BCJ-478-2405-g0005.jpg

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